RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 MTHFD2P13995 350 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 AFF3P51826 1226 aaKnown RBP18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 ABRQ12979 859 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 SP140Q13342 867 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 PPP1R3AQ16821 1122 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 CGB2Q6NT52 195 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 LAYNQ6UX15 382 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 GPSM1Q86YR5 675 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 DLG3Q92796 817 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 SLC12A9Q9BXP2 914 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 PITPNM3Q9BZ71 974 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 TMEM168Q9H0V1 697 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 OXSMQ9NWU1 459 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 KCNK6Q9Y257 313 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 ST14Q9Y5Y6 855 aa18.49■□□□□ 0.55
PDLIM3-202ENST00000284770 SCAMP1O15126 338 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 VILLO15195 856 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 RASGRP1O95267 797 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 TPBGLP0DKB5 382 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 ATP5F1P24539 256 aaPredicted RBP18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 BLKP51451 505 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 CLCNKAP51800 687 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 BST1Q10588 318 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 TGFBIQ15582 683 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 ZCCHC23Q6ZST2 131 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 UBE2R2Q712K3 238 aaPredicted RBP18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 SPATS2Q86XZ4 545 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 RASGRP3Q8IV61 690 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 SKA1Q96BD8 255 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 FOPNLQ96NB1 174 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 NSRP1Q9H0G5 558 aaKnown RBP18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 OSGEPL1Q9H4B0 414 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 RDH14Q9HBH5 336 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 PARVBQ9HBI1 364 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 KLF15Q9UIH9 416 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 OARD1Q9Y530 152 aa18.48■□□□□ 0.55
PDLIM3-202ENST00000284770 UBXN8O00124 270 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SMIM24O75264 130 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SNNO75324 88 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PSIP1O75475 530 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 ENO2P09104 434 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 IDSP22304 550 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 ACADLP28330 430 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 CSNK1EP49674 416 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 CTBSQ01459 385 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PHKG1Q16816 387 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 ATG16L1Q676U5 607 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 FRA10AC1Q70Z53 315 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 CEP68Q76N32 757 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PIGWQ7Z7B1 504 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PDZD3Q86UT5 571 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 EXT2Q93063 718 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 CCDC126Q96EE4 140 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 UTP6Q9NYH9 597 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 THADAQ6YHU6 1953 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 NEMP2A6NFY4 417 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PRR5-ARHGAP8B1AHC4 643 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SUPT3HB4E1H0 165 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SUPT3HO75486 399 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 IPO13O94829 963 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 RPL10P27635 214 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 NXPH1P58417 271 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 ZNF542PQ5EBM4 170 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SLC22A9Q8IVM8 553 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SPDYE1Q8NFV5 336 aaPredicted RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 CFAP61Q8NHU2 1237 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 SREK1Q8WXA9 508 aaKnown RBP18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PSMD13Q9UNM6 376 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PDE10AQ9Y233 779 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 PCDHGA2Q9Y5H1 932 aa18.47■□□□□ 0.55
PDLIM3-202ENST00000284770 GON4LQ3T8J9 2241 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 A0A1B0GTW7 788 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 A8MT66 165 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 PRR33A8MZF0 331 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 KLK8O60259 260 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 TRIM13O60858 407 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 SERPINE1P05121 402 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 GNSP15586 552 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 CYP2A7P20853 494 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 RPIAP49247 311 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 NFKB2Q00653 900 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 OCRLQ01968 901 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 TEAD4Q15561 434 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 LIPMQ5VYY2 423 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 CAPRIN2Q6IMN6 1127 aaKnown RBP18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 PHACTR4Q8IZ21 702 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 TRIM54Q9BYV2 358 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 ZDHHC5Q9C0B5 715 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 C20orf27Q9GZN8 174 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 WWP1Q9H0M0 922 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 TCEAL2Q9H3H9 227 aaPredicted RBP18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 DNAJC28Q9NX36 388 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 NUDT4Q9NZJ9 180 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 CD274Q9NZQ7 290 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 PILRBQ9UKJ0 227 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 TMCO1Q9UM00 188 aa18.46■□□□□ 0.55
PDLIM3-202ENST00000284770 NCF1BA6NI72 391 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 NCF1CA8MVU1 366 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 IFRD1O00458 451 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 FFAR2O15552 330 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms