RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ADH1CP00326 375 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 SOD1P00441 154 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 G6PDP11413 515 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 GSTA3Q16772 222 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 HABP4Q5JVS0 413 aaKnown RBP22.66■■□□□ 1.22
RAB40B-201ENST00000269347 NEK5Q6P3R8 708 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 SKA2Q8WVK7 121 aaPredicted RBP22.66■■□□□ 1.22
RAB40B-201ENST00000269347 MTIF3Q9H2K0 278 aaKnown RBP22.66■■□□□ 1.22
RAB40B-201ENST00000269347 SPAG4Q9NPE6 437 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 CMTM6Q9NX76 183 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 ARL15Q9NXU5 204 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 ZNHIT2Q9UHR6 403 aa22.66■■□□□ 1.22
RAB40B-201ENST00000269347 A0A1W2PQ67 120 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 GIPC1O14908 333 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 CHEK2O96017 543 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 OTCP00480 354 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 DCDC1P59894 354 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 RCAN2Q14206 197 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 TTLL9Q3SXZ7 439 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 CCSMST1Q4G0I0 132 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 CYP2R1Q6VVX0 501 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 HACD2Q6Y1H2 254 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 SPATA19Q7Z5L4 167 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 MIEF2Q96C03 454 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 MTFMTQ96DP5 389 aaKnown RBP22.65■■□□□ 1.22
RAB40B-201ENST00000269347 SPDL1Q96EA4 605 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 SAMD11Q96NU1 681 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 FAM129BQ96TA1 746 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 ZNF184Q99676 751 aaPredicted RBP22.65■■□□□ 1.22
RAB40B-201ENST00000269347 DKK3Q9UBP4 350 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 GULP1Q9UBP9 304 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 ANKRD28O15084 1053 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 TSPAN6O43657 245 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 VPS4BO75351 444 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 FSHRP23945 695 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 NAA20P61599 178 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 TRIM25Q14258 630 aaKnown RBP22.65■■□□□ 1.22
RAB40B-201ENST00000269347 RPS6KA2Q15349 733 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 SGO1Q5FBB7 561 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 SLC15A3Q8IY34 581 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 PLCD3Q8N3E9 789 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 TRAM1L1Q8N609 369 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 DDHD1Q8NEL9 900 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 ASB9Q96DX5 294 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 SLC12A9Q9BXP2 914 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 CNOT6Q9ULM6 557 aaKnown RBP22.65■■□□□ 1.22
RAB40B-201ENST00000269347 USP22Q9UPT9 525 aa22.65■■□□□ 1.22
RAB40B-201ENST00000269347 CBSLP0DN79 551 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 SLC6A2P23975 617 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 CBSP35520 551 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 PREPP48147 710 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 ZNF234Q14588 700 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 ACOX1Q15067 660 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 TLR1Q15399 786 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 ZDHHC20Q5W0Z9 365 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 VITQ6UXI7 678 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 BTN2A2Q8WVV5 523 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 ELMO1Q92556 727 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 SLCO4A1Q96BD0 722 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 ECSITQ9BQ95 431 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 KLQ9UEF7 1012 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 NDUFAF1Q9Y375 327 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 POLR3HQ9Y535 204 aaPredicted RBP22.64■■□□□ 1.21
RAB40B-201ENST00000269347 CROCCQ5TZA2 2017 aa22.64■■□□□ 1.21
RAB40B-201ENST00000269347 STK16O75716 305 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 PAPLNO95428 1278 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 ELFN1P0C7U0 828 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 VASPP50552 380 aaPredicted RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 GRM2Q14416 872 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 NR6A1Q15406 480 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 AP5B1Q2VPB7 878 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 ATP6AP1LQ52LC2 224 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 FNDC3BQ53EP0 1204 aaKnown RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 PDE12Q6L8Q7 609 aaKnown RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 NKX2-4Q9H2Z4 354 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 SUCOQ9UBS9 1254 aaKnown RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 RIMS3Q9UJD0 308 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 PSMD13Q9UNM6 376 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 GFYI3L273 518 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 OPRD1P41143 372 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 AQP4P55087 323 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 TRIP10Q15642 601 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 TIGD2Q4W5G0 525 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 RABL3Q5HYI8 236 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 IL23RQ5VWK5 629 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 XKR5Q6UX68 686 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 RASGRP3Q8IV61 690 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 RNF175Q8N4F7 328 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 PIP4K2CQ8TBX8 421 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 WFIKKN2Q8TEU8 576 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 PKP2Q99959 881 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 ATG10Q9H0Y0 220 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 COPS7BQ9H9Q2 264 aaPredicted RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 INTS7Q9NVH2 962 aaKnown RBP22.63■■□□□ 1.21
RAB40B-201ENST00000269347 LRCH1Q9Y2L9 728 aa22.63■■□□□ 1.21
RAB40B-201ENST00000269347 PRSS51A0A1B0GVH4 220 aa22.62■■□□□ 1.21
RAB40B-201ENST00000269347 SLC22A3O75751 556 aa22.62■■□□□ 1.21
RAB40B-201ENST00000269347 RNASEH2AO75792 299 aaKnown RBP22.62■■□□□ 1.21
RAB40B-201ENST00000269347 ASLP04424 464 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms