RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CPQQ9Y646 472 aa15.96■□□□□ 0.15
SREBF1-201ENST00000261646 PRKCGP05129 697 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 CAPN3P20807 821 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 PAICSP22234 425 aaKnown RBP15.96■□□□□ 0.14
SREBF1-201ENST00000261646 SLC6A2P23975 617 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF157P51786 506 aaPredicted RBP15.96■□□□□ 0.14
SREBF1-201ENST00000261646 RPS3AP61247 264 aaKnown RBP15.96■□□□□ 0.14
SREBF1-201ENST00000261646 SDE2Q6IQ49 451 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 LCN8Q6JVE9 175 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 TBC1D15Q8TC07 691 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 NARS2Q96I59 477 aaKnown RBP15.96■□□□□ 0.14
SREBF1-201ENST00000261646 TEPSINQ96N21 525 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 PCYT2Q99447 389 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 LSM7Q9UK45 103 aaKnown RBP15.96■□□□□ 0.14
SREBF1-201ENST00000261646 MAPRE3Q9UPY8 281 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 RNF6Q9Y252 685 aa15.96■□□□□ 0.14
SREBF1-201ENST00000261646 FPGTO14772 594 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 C9P02748 559 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 VARSP26640 1264 aaKnown RBP15.95■□□□□ 0.14
SREBF1-201ENST00000261646 SCNN1AP37088 669 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CPT1AP50416 773 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 TUBA1BP68363 451 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 IL18Q14116 193 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 MFSD10Q14728 455 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 OR2T5Q6IEZ7 315 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CXCL17Q6UXB2 119 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CLEC20AQ6ZU45 233 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 TUBA1AQ71U36 451 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CYP4Z2PQ8N1L4 340 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 OR2T29Q8NH02 315 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 LRRC20Q8TCA0 184 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 RASSF5Q8WWW0 418 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 AP3S1Q92572 193 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 HMCESQ96FZ2 354 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 SH3YL1Q96HL8 342 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-201ENST00000261646 NPY6RQ99463 290 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 MRPL39Q9NYK5 338 aaKnown RBP15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CCDC59Q9P031 241 aaKnown RBP15.95■□□□□ 0.14
SREBF1-201ENST00000261646 ACOX3O15254 700 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 SSNA1O43805 119 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 MT-ND2P03891 347 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 DNAJB1P25685 340 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 GSTM2P28161 218 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 RAB25P57735 213 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 KCNJ8Q15842 424 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 ALDH16A1Q8IZ83 802 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CRYBG2Q8N1P7 616 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 ACVR1CQ8NER5 493 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 GPR152Q8TDT2 470 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 MMP27Q9H306 513 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 FAM118AQ9NWS6 357 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 GMPR2Q9P2T1 348 aaKnown RBP15.95■□□□□ 0.14
SREBF1-201ENST00000261646 PRKAB1Q9Y478 270 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 DNAJC15Q9Y5T4 150 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 ARVCFO00192 962 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 NIPSNAP2O75323 286 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 STK16O75716 305 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 FUCA1P04066 466 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CD47Q08722 323 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 GALNT2Q10471 571 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 SMARCB1Q12824 385 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 MZT2AQ6P582 158 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 C2CD4AQ8NCU7 369 aaPredicted RBP15.95■□□□□ 0.14
SREBF1-201ENST00000261646 ZFP90Q8TF47 636 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 TADA1Q96BN2 335 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 KCNC2Q96PR1 638 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 RANBP9Q96S59 729 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 BEX2Q9BXY8 128 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 C14orf119Q9NWQ9 140 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 CMTM6Q9NX76 183 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 PCDHB8Q9UN66 801 aa15.95■□□□□ 0.14
SREBF1-201ENST00000261646 ZNF487B1APH4 448 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 COQ9O75208 318 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 CREG1O75629 220 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 CSF2P04141 144 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 HSD17B1P14061 328 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 ATF4P18848 351 aaPredicted RBP15.94■□□□□ 0.14
SREBF1-201ENST00000261646 ATP4BP51164 291 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 SLC10A7Q0GE19 358 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 C11orf88Q6PI97 169 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 FGD2Q7Z6J4 655 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PHACTR4Q8IZ21 702 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 TMEM199Q8N511 208 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 MTMR14Q8NCE2 650 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PTGFRNQ9P2B2 879 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 TCRBV3S1A0A5B6 114 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 TSPAN4O14817 238 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 EDN1P05305 212 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 SMIM10L2AP0DMW4 78 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 SMIM10L2BP0DMW5 78 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PPP2R1BP30154 601 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 AKR1D1P51857 326 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PPP5CP53041 499 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PFKPQ01813 784 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PTPRCAPQ14761 206 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 ACDQ96AP0 544 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PCDHGC4Q9Y5F7 938 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 PCDHGB5Q9Y5G0 923 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 GABRDO14764 452 aa15.94■□□□□ 0.14
SREBF1-201ENST00000261646 KPNA5O15131 536 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms