RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 MARC1Q5VT66 337 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 C2orf69Q8N8R5 385 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 TTC29Q8NA56 475 aaPredicted RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 SMOQ99835 787 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 UCK2Q9BZX2 261 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
CCDC117-201ENST00000249064 POLR3BQ9NW08 1133 aaPredicted RBP13.1□□□□□ -0.31
CCDC117-201ENST00000249064 CENPBD1B2RD01 187 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 IRF1P10914 325 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 ODC1P11926 461 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 CAPN3P20807 821 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 MLLT10P55197 1068 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 ANKRD34AQ69YU3 496 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 CRYBG2Q8N1P7 616 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 SLCO4A1Q96BD0 722 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 BARD1Q99728 777 aaKnown RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 SPRTNQ9H040 489 aaPredicted RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 SLAMF8Q9P0V8 285 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 COL11A2P13942 1736 aaPredicted RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 SLC1A7O00341 560 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 PDE9AO76083 593 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 CD52P31358 61 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 NFE2L1Q14494 772 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 ZRANB3Q5FWF4 1079 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 INTS11Q5TA45 600 aaKnown RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 TBPL2Q6SJ96 375 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 DCP2Q8IU60 420 aaKnown RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 NPLOC4Q8TAT6 608 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 NSUN5Q96P11 429 aaKnown RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 NPY6RQ99463 290 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 SLC2A11Q9BYW1 496 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 MAGEL2Q9UJ55 1249 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 EIF3LQ9Y262 564 aaKnown RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 MCM3APO60318 1980 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 C8BP07358 591 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 FHP07954 510 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 RAP2AP10114 183 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 CDC42EP1Q00587 391 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 FAM187BQ17R55 369 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 PLA2G4EQ3MJ16 856 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 ADAMTS16Q8TE57 1224 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 TUBA1CQ9BQE3 449 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 MLPHQ9BV36 600 aaPredicted RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 GLOD4Q9HC38 313 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 GMIPQ9P107 970 aa13.09□□□□□ -0.31
CCDC117-201ENST00000249064 ZNF624Q9P2J8 865 aaPredicted RBP13.09□□□□□ -0.31
CCDC117-201ENST00000249064 SLC12A8A0AV02 714 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 ATP6V0D1P61421 351 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 AQP6Q13520 282 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 GALNT3Q14435 633 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 RETREG3Q86VR2 466 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 CFAP52Q8N1V2 620 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.31
CCDC117-201ENST00000249064 SLC39A8Q9C0K1 460 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 RANGRFQ9HD47 186 aaPredicted RBP13.08□□□□□ -0.31
CCDC117-201ENST00000249064 FAM118AQ9NWS6 357 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 FBXW11Q9UKB1 542 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 CLEC4AQ9UMR7 237 aa13.08□□□□□ -0.31
CCDC117-201ENST00000249064 A0A087X1B8 175 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 TBX18O95935 607 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 SERPINA1P01009 418 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 RPS3P23396 243 aaKnown RBP eCLIP13.08□□□□□ -0.322e-9■■■■■ 27.7
CCDC117-201ENST00000249064 CASP9P55211 416 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 DSC2Q02487 901 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 CLCA4Q14CN2 919 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 SNAPC1Q16533 368 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 HIST2H2ACQ16777 129 aaPredicted RBP13.08□□□□□ -0.32
CCDC117-201ENST00000249064 BCL7AQ4VC05 210 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 TIGD5Q53EQ6 642 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 ATAD3CQ5T2N8 411 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 KRT74Q7RTS7 529 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 ADGRG5Q8IZF4 528 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 LSM14AQ8ND56 463 aaKnown RBP13.08□□□□□ -0.32
CCDC117-201ENST00000249064 AURKBQ96GD4 344 aaPredicted RBP13.08□□□□□ -0.32
CCDC117-201ENST00000249064 TMEM209Q96SK2 561 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 ADAM2Q99965 735 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 MKS1Q9NXB0 559 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 POLG2Q9UHN1 485 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 TCRBV3S1A0A5B6 114 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 H0YJX3 145 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 UPK1BO75841 260 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 CNTN5O94779 1100 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 SLC35E2BP0CK96 405 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 KCNA5P22460 613 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
CCDC117-201ENST00000249064 HUNKP57058 714 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 EMX1Q04741 257 aaPredicted RBP13.08□□□□□ -0.32
CCDC117-201ENST00000249064 STXBP5Q5T5C0 1151 aa13.08□□□□□ -0.32
CCDC117-201ENST00000249064 GALNT10Q86SR1 603 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms