RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TMPRSS9Q7Z410 1059 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 FCGR1BQ92637 280 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 GPR78Q96P69 363 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 CGRRF1Q99675 332 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 C11orf54Q9H0W9 315 aaPredicted RBP12.81□□□□□ -0.36
MSH2-201ENST00000233146 FKBP7Q9Y680 259 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 PTPRJQ12913 1337 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 MYO18AQ92614 2054 aaKnown RBP12.81□□□□□ -0.36
MSH2-201ENST00000233146 A0A1B0GVM2 712 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 A0A1W2PP18 115 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 BTN3A1O00481 513 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 PMPCBO75439 489 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 ERN1O75460 977 aaKnown RBP12.81□□□□□ -0.36
MSH2-201ENST00000233146 MT-CO1P00395 513 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 SLC35E2BP0CK96 405 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 GTF2A2P52657 109 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 PGGT1BP53609 377 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 CDH13P55290 713 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 RUNX1T1Q06455 604 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 ATOH1Q92858 354 aaPredicted RBP12.81□□□□□ -0.36
MSH2-201ENST00000233146 LDAHQ9H6V9 325 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 HEXA-AS1Q9H8Q6 139 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
MSH2-201ENST00000233146 CLRN2A0PK11 232 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 ATP6AP2O75787 350 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 SDC4P31431 198 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 HNF1BP35680 557 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 KIR2DL3P43628 341 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CCT3P49368 545 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 CLCNKAP51800 687 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 ERVFC1P60507 584 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CHRNB3Q05901 458 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 MAB21L1Q13394 359 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 BNIPLQ7Z465 357 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CUZD1Q86UP6 607 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 COQ8BQ96D53 544 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 PGLYRP2Q96PD5 576 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 GPR22Q99680 433 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 AMNQ9BXJ7 453 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 SRRQ9GZT4 340 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 POMKQ9H5K3 350 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 C3orf14Q9HBI5 128 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 ACSL5Q9ULC5 683 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 LOC100506127A0A0U1RQW1 187 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 C9JVG2 144 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 F5H423 210 aaPredicted RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 RAF1P04049 648 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 EFNA1P20827 205 aaPredicted RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 OR4D2P58180 307 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 QPRTQ15274 297 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 SMN1Q16637 294 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 TATDN3Q17R31 274 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RAB6CQ53S08 254 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 BSPRYQ5W0U4 402 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CYP4Z2PQ8N1L4 340 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 C19orf60Q96EN9 201 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 KCNS3Q9BQ31 491 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RAB6CQ9H0N0 254 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 EML4Q9HC35 981 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 CD93Q9NPY3 652 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 EIF2B3Q9NR50 452 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 GPRC5BQ9NZH0 403 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CYTH4Q9UIA0 394 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 TINAGQ9UJW2 476 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 ALG5Q9Y673 324 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 SEC14L5O43304 696 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 MATN4O95460 622 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CYP4F2P78329 520 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 CYP4F3Q08477 520 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RFX4Q33E94 735 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 SPESP1Q6UW49 350 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 XYLT1Q86Y38 959 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 C3orf30Q96M34 536 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 ZSWIM3Q96MP5 696 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 TMEM74Q96NL1 305 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 MRPL57Q9BQC6 102 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 OR51E2Q9H255 320 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RC3H2Q9HBD1 1191 aaKnown RBP12.8□□□□□ -0.36
MSH2-201ENST00000233146 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RAB23Q9ULC3 237 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 ACOT9Q9Y305 439 aa12.8□□□□□ -0.36
MSH2-201ENST00000233146 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
MSH2-201ENST00000233146 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 NT5C1B-RDH14C9J2C7 533 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 FAM20BO75063 409 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 ATG7O95352 703 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 HOXC5Q00444 222 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 SP140Q13342 867 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 NFYCQ13952 458 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 FUT11Q495W5 492 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 DENND1BQ6P3S1 775 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 FAM183BPQ6ZVS7 135 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 MIER2Q8N344 545 aa12.79□□□□□ -0.36
MSH2-201ENST00000233146 ITFG1Q8TB96 612 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms