RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Trappc9Q3U0M1 1148 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tnks2Q3UES3 1166 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cdk15Q3V3A1 433 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Slc6a4Q60857 630 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ces5aQ6AW46 575 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Snx31Q6P8Y7 439 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr1313Q7TQW8 311 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fem1cQ8CEF1 617 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Glis1Q8K1M4 789 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Kdelr3Q8R1L4 214 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Utp6Q8VCY6 597 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 GcshQ91WK5 170 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ptgr1Q91YR9 329 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 HnrnpllQ921F4 591 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Acer3Q9D099 267 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ttc25Q9D4B2 624 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Dusp26Q9D700 211 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr706Q9EPF8 316 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Sh3glb1Q9JK48 365 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Htra1Q9R118 480 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 HephQ9Z0Z4 1157 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Stau1Q9Z108 487 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Clic1Q9Z1Q5 241 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Shroom3Q9QXN0 1986 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr839-ps1A0A1D5RMH6 312 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Arhgap36B1AUC7 590 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Sult2a6B2RVI8 285 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fam124aD3Z5V4 536 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Grk4O70291 574 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Zfp14P10755 501 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Psme2P97372 239 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rsrp1Q3UC65 298 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Q3UK37 420 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 D13Ertd608eQ3UPR8 151 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ckmt2Q6P8J7 419 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rmnd5aQ80YQ8 391 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 PdhxQ8BKZ9 501 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gin1Q8K259 518 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cys1Q8R4T1 145 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Klrb1fQ8VD98 217 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Chil4Q91Z98 402 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 EtfaQ99LC5 333 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fam90a1bQ9D4F3 419 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Glod5Q9D8I3 148 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pld1Q9Z280 1074 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm43951A0A0N4SUT6 962 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm20441G3UYJ7 252 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm3642K7N6V4 267 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Atn1O35126 1175 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ldb2O55203 373 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ankrd27Q3UMR0 1048 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tmem247Q497K7 211 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Myo1dQ5SYD0 1006 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 HadhQ61425 314 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Angptl1Q640P2 490 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Bcl2l1Q64373 233 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tnpo3Q6P2B1 923 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Scn4bQ7M729 228 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr664Q7TRP5 306 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Stx19Q8R1Q0 292 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr371Q8VGB8 312 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pcdhb17Q91VD8 799 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr703Q9EPF5 319 aa9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rfc2Q9WUK4 349 aaKnown RBP9.58□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tspoap1Q7TNF8 1846 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr564E9PWA8 316 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn2r31L7N1Z4 861 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Neurod4O09105 330 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Alox8O35936 677 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gnpda1O88958 289 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cdh1P09803 884 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 C1qbP14106 253 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 CtsdP18242 410 aaKnown RBP9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Acvr2bP27040 536 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gdf5P43027 495 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Txnl4aP83877 142 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 BcheQ03311 603 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cpne7Q0VE82 557 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mansc4Q3UU94 337 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Sel1l2Q3V172 688 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tapt1Q4VBD2 564 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Krtcap2Q5RL79 136 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 A4galtQ67BJ4 359 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Wipi2Q80W47 445 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Q810N5 247 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Scn3bQ8BHK2 215 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Smad3Q8BUN5 425 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ston2Q8BZ60 895 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mfsd14bQ8CIA9 507 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Hmgcs1Q8JZK9 520 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rnf8Q8VC56 488 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ptgr2Q8VDQ1 351 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 B3galt6Q91Z92 325 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Aco2Q99KI0 780 aaKnown RBP9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Atp13a2Q9CTG6 1169 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ribc2Q9D4Q1 309 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fundc2Q9D6K8 151 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Leng1Q9DB98 261 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Hmg20aQ9DC33 346 aa9.57□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mrpl46Q9EQI8 283 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms