RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZBTB14O43829 449 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 TYROBPO43914 113 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 NME1P15531 152 aaKnown RBP17.11■□□□□ 0.33
PHGDH-230ENST00000641927 TFEBP19484 476 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 IDSP22304 550 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 RPA3P35244 121 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-230ENST00000641927 HOXD12P35452 270 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 ATP6V0D1P61421 351 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 IRX4P78413 519 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 DMPKQ09013 629 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 ABRQ12979 859 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 C1orf61Q13536 156 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 GBX1Q14549 363 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 DUOXA1Q1HG43 343 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 RABEPKQ7Z6M1 372 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 LCA5Q86VQ0 697 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 SLC22A15Q8IZD6 547 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 ANKRD42Q8N9B4 389 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 CCDC63Q8NA47 563 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 CEP76Q8TAP6 659 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 PRRX2Q99811 253 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 ALG9Q9H6U8 611 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
PHGDH-230ENST00000641927 FSCN3Q9NQT6 498 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 ST14Q9Y5Y6 855 aa17.11■□□□□ 0.33
PHGDH-230ENST00000641927 EIF3FO00303 357 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 CDC7O00311 574 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 NR1D1P20393 614 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 CLCNKAP51800 687 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 RPA4Q13156 261 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 ACAP2Q15057 778 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PEAR1Q5VY43 1037 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 TAF8Q7Z7C8 310 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PDLIM5Q96HC4 596 aaKnown RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 LRRC61Q9BV99 259 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 GSDMCQ9BYG8 508 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 WWP1Q9H0M0 922 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 DPEP2Q9H4A9 486 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 SLC17A7Q9P2U7 560 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 ACSL5Q9ULC5 683 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 LRP4O75096 1905 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PATE3B3GLJ2 98 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PRPF4O43172 522 aaKnown RBP eCLIP17.1■□□□□ 0.333e-6■■■■□ 19.9
PHGDH-230ENST00000641927 SDC3O75056 442 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 MPC1LP0DKB6 136 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 OAS2P29728 719 aaKnown RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 CTSKP43235 329 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 HNRNPKP61978 463 aaKnown RBP eCLIP17.1■□□□□ 0.333e-7■□□□□ 8.5
PHGDH-230ENST00000641927 PPP2R2AP63151 447 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 TSNQ15631 228 aaKnown RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 CCDC6Q16204 474 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 TRIM61Q5EBN2 209 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 XKR5Q6UX68 686 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 FSTL5Q8N475 847 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 MGARPQ8TDB4 240 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 LMX1AQ8TE12 382 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 EXT2Q93063 718 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PTERQ96BW5 349 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 LOXL4Q96JB6 756 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 FOPNLQ96NB1 174 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 GPR78Q96P69 363 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 FAM111AQ96PZ2 611 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 ARRDC1-AS1Q9H2J1 176 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PRDM8Q9NQV8 689 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 NKIRAS1Q9NYS0 192 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 CPSF2Q9P2I0 782 aaKnown RBP17.1■□□□□ 0.33
PHGDH-230ENST00000641927 IKZF3Q9UKT9 509 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 PLLPQ9Y342 182 aa17.1■□□□□ 0.33
PHGDH-230ENST00000641927 IFRD1O00458 451 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-230ENST00000641927 CELA2BP08218 269 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-230ENST00000641927 TCF15Q12870 199 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 ELOCQ15369 112 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 LVRNQ6Q4G3 990 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 CYHR1Q6ZMK1 362 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 NEK10Q6ZWH5 1172 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 FRA10AC1Q70Z53 315 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 ISCA2Q86U28 154 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 ARMC2Q8NEN0 867 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 PRSS33Q8NF86 280 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 GPBAR1Q8TDU6 330 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 OR52A5Q9H2C5 316 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 ERVMER34-1Q9H9K5 563 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 MLXIPLQ9NP71 852 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 XPR1Q9UBH6 696 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 SPASTQ9UBP0 616 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 TBC1D29Q9UFV1 150 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 RNF112Q9ULX5 631 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 DOLKQ9UPQ8 538 aa17.09■□□□□ 0.33
PHGDH-230ENST00000641927 TK2O00142 265 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 TM9SF1O15321 606 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 EPN2O95208 641 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 ZWINTO95229 277 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 RBP1P09455 135 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 LAMA1P25391 3075 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 MPLP40238 635 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 HALP42357 657 aa17.08■□□□□ 0.32
PHGDH-230ENST00000641927 ARRB1P49407 418 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms