RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PNPOQ9NVS9 261 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 MARCOQ9UEW3 520 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-221ENST00000641573 DCTN4Q9UJW0 460 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TMCO1Q9UM00 188 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 IGF2RP11717 2491 aa12.87□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3DA0A087WVF3 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3IA0A087WXS9 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3EA0A087X179 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3KA0A087X1G2 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3FA6NER0 549 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3LB9A6J9 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 EIF3FO00303 357 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 AXIN1O15169 862 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 KLK8O60259 260 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 ATG13O75143 517 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 CDK14O94921 469 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 CHRNGP07510 517 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3HP0C7X1 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 ZNF806P0C7X5 589 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 KITP10721 976 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 ENO3P13929 434 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 GABRG2P18507 467 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 SERPINB5P36952 375 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 CCR10P46092 362 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 PRLHRP49683 370 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 HK3P52790 923 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 ARFIP2P53365 341 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 SGCGQ13326 291 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 GTF2H3Q13889 308 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 BOP1Q14137 746 aaKnown RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 FGL2Q14314 439 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 GBX1Q14549 363 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 PFKFB4Q16877 469 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 UNC50Q53HI1 259 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 ARL13AQ5H913 290 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 ZNF678Q5SXM1 525 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3GQ6DHY5 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3CQ6IPX1 549 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 C6orf89Q6UWU4 347 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 Q6ZS52 159 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 FAM124AQ86V42 546 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 HORMAD1Q86X24 394 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 SPATS2Q86XZ4 545 aaKnown RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TBC1D3Q8IZP1 549 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 LSMEM2Q8N112 164 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 FBXO39Q8N4B4 442 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 PIWIL2Q8TC59 973 aaKnown RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 KLK6Q92876 244 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 COL26A1Q96A83 441 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 COX14Q96I36 57 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 PLCD4Q9BRC7 762 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 CCM2Q9BSQ5 444 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 KCNK13Q9HB14 408 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 TRIM39Q9HCM9 518 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 MBNL1Q9NR56 388 aaKnown RBP12.86□□□□□ -0.35
PHGDH-221ENST00000641573 NUDT4Q9NZJ9 180 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 USH1CQ9Y6N9 552 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 LRRK1Q38SD2 2015 aa12.86□□□□□ -0.35
PHGDH-221ENST00000641573 A0A0G2JND7 137 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 NUAK1O60285 661 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 SNX2O60749 519 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 PAK4O96013 591 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 MPC1LP0DKB6 136 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 MPSTP25325 297 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 TEAD1P28347 426 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 NOVA1P51513 510 aaKnown RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 HERVK_113P63132 956 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 HSPA14Q0VDF9 509 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 FOXC1Q12948 553 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 IFT88Q13099 833 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 PRKAA1Q13131 559 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 IRF4Q15306 451 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 CCDC6Q16204 474 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 BCL7AQ4VC05 210 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 NEK5Q6P3R8 708 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 SBSNQ6UWP8 590 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 FRA10AC1Q70Z53 315 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 HEATR4Q86WZ0 1026 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 SYNPOQ8N3V7 929 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 ZNF781Q8N8C0 355 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 TP53I13Q8NBR0 393 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 LOXL4Q96JB6 756 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 TMEM120AQ9BXJ8 343 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 ERVK-6Q9BXR3 956 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 SLC17A9Q9BYT1 436 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 ILKAPQ9H0C8 392 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 GSTO2Q9H4Y5 243 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 POLMQ9NP87 494 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-221ENST00000641573 KCNK4Q9NYG8 393 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 CD274Q9NZQ7 290 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 ATXN10Q9UBB4 475 aa12.85□□□□□ -0.35
PHGDH-221ENST00000641573 ADAMTS6Q9UKP5 1117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms