RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 FAM83CQ9BQN1 747 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GPAMQ9HCL2 828 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SLC38A7Q9NVC3 462 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SOHLH2Q9NX45 425 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CTSFQ9UBX1 484 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 LIMD1Q9UGP4 676 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RAB26Q9ULW5 256 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GUCA1BQ9UMX6 200 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF451Q9Y4E5 1061 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SCN5AQ14524 2016 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CD36P16671 472 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ECHS1P30084 290 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GPR4P46093 362 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 EIF3MQ7L2H7 374 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MISPQ8IVT2 679 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 FAM156AQ8NDB6 213 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MITD1Q8WV92 249 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NANOS1Q8WY41 292 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SNAPC3Q92966 411 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 LATS2Q9NRM7 1088 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TMEM39AQ9NV64 488 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 KCND3Q9UK17 655 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GRIP1Q9Y3R0 1128 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PUS1Q9Y606 427 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 A0A1W2PP64 1363 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CUX1P39880 1505 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CLASP1Q7Z460 1538 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TPP1O14773 563 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ZMYM6O95789 1325 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 INHBAP08476 426 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ZNF10P21506 573 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CD6P30203 668 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 BRCC3P46736 316 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 FXR2P51116 673 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RAB5BP61020 215 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MC1RQ01726 317 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CHRNDQ07001 517 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MFSD13AQ14CX5 517 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MTHFSDQ2M296 383 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 LRRC66Q68CR7 880 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PNPLA6Q8IY17 1366 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MEIOBQ8N635 442 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 POU5F2Q8N7G0 328 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MRPL43Q8N983 215 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RASGRP4Q8TDF6 673 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GTF2H4Q92759 462 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SERAC1Q96JX3 654 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PCYT2Q99447 389 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SORBS1Q9BX66 1292 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 VAPAQ9P0L0 249 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ANAPC2Q9UJX6 822 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ADAM30Q9UKF2 790 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ERVW-1Q9UQF0 538 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ARNTLO00327 626 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 EEF2KO00418 725 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SLC28A2O43868 658 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 AKR1A1P14550 325 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MSX1P28360 303 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 IL13P35225 146 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RAB2AP61019 212 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 FBXO47Q5MNV8 452 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SYDE1Q6ZW31 735 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NUDT13Q86X67 352 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ZDHHC14Q8IZN3 488 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MCUQ8NE86 351 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NKD2Q969F2 451 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 FEM1CQ96JP0 617 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 C1QTNF1Q9BXJ1 281 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SLC5A7Q9GZV3 580 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PDLIM7Q9NR12 457 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 RIC8BQ9NVN3 520 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GDE1Q9NZC3 331 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CA14Q9ULX7 337 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PPIL1Q9Y3C6 166 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 AP4B1Q9Y6B7 739 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TDRD6O60522 2096 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PRRG1O14668 218 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 LRRTM2O43300 516 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 GATBO75879 557 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 VNN1O95497 513 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 CSTBP04080 98 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 LIPFP07098 398 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ASGR2P07307 311 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 ATF2P15336 505 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NR2F2P24468 414 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 MPIP34949 423 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 NHLH2Q02577 135 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SLC9A3R2Q15599 337 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 SPRED3Q2MJR0 410 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 HNRNPA1L2Q32P51 320 aaKnown RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 BEX5Q5H9J7 111 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 FAM109BQ6ICB4 259 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-209ENST00000639244 TAF2Q6P1X5 1199 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 BTLAQ7Z6A9 289 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 PIGWQ7Z7B1 504 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 DHDDSQ86SQ9 333 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 DSELQ8IZU8 1212 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 C4orf33Q8N1A6 199 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 COMMD1Q8N668 190 aa4.25□□□□□ -1.73
SCN3A-209ENST00000639244 OSBPL11Q9BXB4 747 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms