RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 CSF3RQ99062 836 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 THUMPD3Q9BV44 507 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 OSBPL10Q9BXB5 764 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GPR62Q9BZJ7 368 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 DNAJB9Q9UBS3 223 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 OR6C75A6NL08 312 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 ZSCAN9O15535 394 aaPredicted RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 CBFA2T3O75081 653 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GUCA1CO95843 209 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 OTCP00480 354 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 RHOCP08134 193 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GSTM2P28161 218 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 ATP5C1P36542 298 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 HSPA7P48741 367 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 RPL38P63173 70 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 TRAF3Q13114 568 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 LAPTM5Q13571 262 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 IMPG1Q17R60 797 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 DENND1CQ8IV53 801 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 RBM12BQ8IXT5 1001 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 TTC16Q8NEE8 873 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 ZNF548Q8NEK5 533 aaPredicted RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 RAB2BQ8WUD1 216 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 LINC01599Q8WXQ3 324 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GTF2H4Q92759 462 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 HDAC2Q92769 488 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 SLC47A1Q96FL8 570 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 PPP3R2Q96LZ3 170 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 RDH12Q96NR8 316 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 FEM1AQ9BSK4 669 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 AMBRA1Q9C0C7 1298 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 IKZF5Q9H5V7 419 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 GPN2Q9H9Y4 310 aaPredicted RBP9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 ZNF711Q9Y462 761 aa9.38□□□□□ -0.91
HNRNPU-216ENST00000638716 TAPBPO15533 448 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 TSPAN3O60637 253 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 GJB5O95377 273 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 S100BP04271 92 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ZNF12P17014 697 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PIGAP37287 484 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PIK3CGP48736 1102 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 SLC11A2P49281 568 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PSMD7P51665 324 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PLA2G16P53816 162 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 TPD52P55327 224 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 RAB15P59190 212 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CYP4F3Q08477 520 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 TRIM32Q13049 653 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 GPR17Q13304 367 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 MAPKAPK3Q16644 382 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 MEP1AQ16819 746 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 FAM174BQ3ZCQ3 159 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 C6orf141Q5SZD1 244 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ADAMTSL2Q86TH1 951 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 SLC15A4Q8N697 577 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CHDHQ8NE62 594 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ZNF555Q8NEP9 628 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CCDC97Q96F63 343 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 TBCDQ9BTW9 1192 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 NSUN3Q9H649 340 aaKnown RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 RETREG1Q9H6L5 497 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ELOVL2Q9NXB9 296 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 DNMT3LQ9UJW3 386 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PSME2Q9UL46 239 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CORINQ9Y5Q5 1042 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 SLC30A1Q9Y6M5 507 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ILVBLA1L0T0 632 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ELOVL7A1L3X0 281 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 SLC38A8A6NNN8 435 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 C16orf96A6NNT2 1141 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 J3QRK9 145 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 GNGT2O14610 69 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PRMT5O14744 637 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 RAD51BO15315 384 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 SEPT4O43236 478 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 TBC1D4O60343 1298 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CLDN11O75508 207 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PRAMEF12O95522 483 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 HTR1AP08908 422 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ITGB6P18564 788 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 MSH3P20585 1137 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 NKX3-2P78367 333 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ARF5P84085 180 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CACNG1Q06432 222 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PIGFQ07326 219 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 PPP1R8Q12972 351 aaKnown RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 ZNF177Q13360 481 aaPredicted RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 BFSP2Q13515 415 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 CTU2Q2VPK5 515 aaKnown RBP9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 MFSD14CQ5VZR4 134 aa9.37□□□□□ -0.91
HNRNPU-216ENST00000638716 LINGO4Q6UY18 593 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms