RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RMDN2Q96LZ7 410 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 DCBLD2Q96PD2 775 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 TAAR9Q96RI9 348 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 KIR3DX1Q9H7L2 352 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 MVB12BQ9H7P6 319 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 SLC24A2Q9UI40 661 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 RPS6KL1Q9Y6S9 549 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 ASPMQ8IZT6 3477 aa16.34■□□□□ 0.21
UBE3D-208ENST00000626828 FREM2Q5SZK8 3169 aa16.33■□□□□ 0.21
UBE3D-208ENST00000626828 SLC5A10A0PJK1 596 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 B4E171 279 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 FGF3P11487 239 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-208ENST00000626828 CCL4P13236 92 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 ITIH1P19827 911 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 RPS3P23396 243 aaKnown RBP eCLIP16.33■□□□□ 0.2
UBE3D-208ENST00000626828 ARNTP27540 789 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 TSPAN7P41732 249 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 PLCL1Q15111 1095 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 IZUMO3Q5VZ72 239 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 PTRHD1Q6GMV3 140 aaKnown RBP16.33■□□□□ 0.2
UBE3D-208ENST00000626828 NEPROQ6NW34 567 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 SYT10Q6XYQ8 523 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 OTUD6BQ8N6M0 293 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 PHC3Q8NDX5 983 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 ASZ1Q8WWH4 475 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 USP7Q93009 1102 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 FCRL3Q96P31 734 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-208ENST00000626828 TGM7Q96PF1 710 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 DPH1Q9BZG8 443 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 KLHL3Q9UH77 587 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 MAD1L1Q9Y6D9 718 aa16.33■□□□□ 0.2
UBE3D-208ENST00000626828 MN1Q10571 1320 aaPredicted RBP16.33■□□□□ 0.2
UBE3D-208ENST00000626828 KPNA5O15131 536 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 USP1O94782 785 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 ANKRD34CP0C6C1 535 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 ETV5P41161 510 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 CAPZBP47756 277 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 PREPP48147 710 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 THOC5Q13769 683 aaKnown RBP16.32■□□□□ 0.2
UBE3D-208ENST00000626828 MORF4L2Q15014 288 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 BRD3Q15059 726 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 RNF187Q5TA31 235 aaPredicted RBP16.32■□□□□ 0.2
UBE3D-208ENST00000626828 PDZD3Q86UT5 571 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 ACVR1CQ8NER5 493 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 HNRNPLLQ8WVV9 542 aaKnown RBP16.32■□□□□ 0.2
UBE3D-208ENST00000626828 RSC1A1Q92681 617 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 ZNF669Q96BR6 464 aaPredicted RBP16.32■□□□□ 0.2
UBE3D-208ENST00000626828 PANX3Q96QZ0 392 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 P2RY12Q9H244 342 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 HRASLS2Q9NWW9 162 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 OCIAD1Q9NX40 245 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 SLC39A1Q9NY26 324 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 GNPTGQ9UJJ9 305 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 ACSL6Q9UKU0 697 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 VPS9D1Q9Y2B5 631 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 FAM169AQ9Y6X4 670 aa16.32■□□□□ 0.2
UBE3D-208ENST00000626828 DSPP15924 2871 aaKnown RBP16.32■□□□□ 0.2
UBE3D-208ENST00000626828 EFCAB7A8K855 629 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 GOLGA8KD6RF30 607 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 GOLGA8TH3BQL2 631 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 TTI1O43156 1089 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 APOA4P06727 396 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 ITGB6P18564 788 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 OGNP20774 298 aaKnown RBP16.31■□□□□ 0.2
UBE3D-208ENST00000626828 CD82P27701 267 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 ACADLP28330 430 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 CCR7P32248 378 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 GFERP55789 205 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 MC2RQ01718 297 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 BOP1Q14137 746 aaKnown RBP16.31■□□□□ 0.2
UBE3D-208ENST00000626828 SYTL3Q4VX76 610 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 DNAJC21Q5F1R6 531 aaKnown RBP16.31■□□□□ 0.2
UBE3D-208ENST00000626828 CACHD1Q5VU97 1274 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 ARMC6Q6NXE6 501 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 IRGCQ6NXR0 463 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 DUS1LQ6P1R4 473 aaKnown RBP16.31■□□□□ 0.2
UBE3D-208ENST00000626828 MAATS1Q7Z4T9 603 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 LMNTD2Q8IXW0 634 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 PDIK1LQ8N165 341 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 SPATA4Q8NEY3 305 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 OR4E2Q8NGC2 313 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 CALML6Q8TD86 181 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 KCNE4Q8WWG9 221 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 LCN9Q8WX39 176 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 STAMBPL1Q96FJ0 436 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 KRT12Q99456 494 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 NAT9Q9BTE0 207 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 ASPSCR1Q9BZE9 553 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 TFB2MQ9H5Q4 396 aaKnown RBP16.31■□□□□ 0.2
UBE3D-208ENST00000626828 FBXO8Q9NRD0 319 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 POLG2Q9UHN1 485 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 PCDHGA3Q9Y5H0 932 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 PTPRQQ9UMZ3 2332 aa16.31■□□□□ 0.2
UBE3D-208ENST00000626828 ZCWPW2A0A1B0GU75 182 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 UBA6A0AVT1 1052 aaPredicted RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 OR5K3A6NET4 321 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 IQCF5A8MTL0 148 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
UBE3D-208ENST00000626828 H3BMM5 538 aa16.3■□□□□ 0.2
UBE3D-208ENST00000626828 NDC80O14777 642 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms