RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 EPS15L1Q9UBC2 864 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 SARDHQ9UL12 918 aa16.05■□□□□ 0.16
LDB3-208ENST00000623007 LRRC14BA6NHZ5 514 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 KAT7O95251 611 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 NPPAP01160 153 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 MAP4P27816 1152 aaKnown RBP16.04■□□□□ 0.16
LDB3-208ENST00000623007 ARL1P40616 181 aaPredicted RBP16.04■□□□□ 0.16
LDB3-208ENST00000623007 SLC6A11P48066 632 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 SLC34A1Q06495 639 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 FOXM1Q08050 763 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 HSPA14Q0VDF9 509 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 GTF2H3Q13889 308 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 GGTA1PQ4G0N0 100 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 SYTL3Q4VX76 610 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 PDCD4Q53EL6 469 aaKnown RBP16.04■□□□□ 0.16
LDB3-208ENST00000623007 SWT1Q5T5J6 900 aaKnown RBP16.04■□□□□ 0.16
LDB3-208ENST00000623007 SYCE2Q6PIF2 218 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 PRR23BQ6ZRT6 265 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 ELMO1Q92556 727 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 DLG3Q92796 817 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 RCN3Q96D15 328 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 HOPXQ9BPY8 73 aaPredicted RBP16.04■□□□□ 0.16
LDB3-208ENST00000623007 CCM2Q9BSQ5 444 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 BRINP2Q9C0B6 783 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 VCX3BQ9H321 246 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 GID8Q9NWU2 228 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 CCDC167Q9P0B6 97 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 G3BP2Q9UN86 482 aaKnown RBP16.04■□□□□ 0.16
LDB3-208ENST00000623007 DENND4AQ7Z401 1863 aa16.04■□□□□ 0.16
LDB3-208ENST00000623007 LIN7AO14910 233 aaPredicted RBP16.03■□□□□ 0.16
LDB3-208ENST00000623007 RGS14O43566 566 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 AP1G1O43747 822 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 VEGFDO43915 354 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 UGDHO60701 494 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 STAMBPO95630 424 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 KRT6AP02538 564 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 KRT6BP04259 564 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 GPX3P22352 226 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 CA5AP35218 305 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 OPRD1P41143 372 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 TNFRSF4P43489 277 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 KRT6CP48668 564 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 HYAL1Q12794 435 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 BCL7AQ4VC05 210 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 MYLK4Q86YV6 388 aaPredicted RBP16.03■□□□□ 0.16
LDB3-208ENST00000623007 CXorf40AQ8TE69 158 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 WDR60Q8WVS4 1066 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 SCAMP4Q969E2 229 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 NUS1Q96E22 293 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 NECTIN4Q96NY8 510 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 TRMT61BQ9BVS5 477 aaKnown RBP16.03■□□□□ 0.16
LDB3-208ENST00000623007 CD84Q9UIB8 345 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 TMPRSS11EQ9UL52 423 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 GPR34Q9UPC5 381 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 ST14Q9Y5Y6 855 aa16.03■□□□□ 0.16
LDB3-208ENST00000623007 C17orf113A0A1B0GUU1 675 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ANGPT2O15123 496 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 TSPAN6O43657 245 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 LZTS3O60299 673 aaPredicted RBP16.02■□□□□ 0.16
LDB3-208ENST00000623007 OR4F21O95013 312 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ANP32DO95626 131 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 GUCA1CO95843 209 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ADH1BP00325 375 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 CATP04040 527 aaKnown RBP16.02■□□□□ 0.16
LDB3-208ENST00000623007 CAPN1P07384 714 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 LINC00032P0C843 101 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 LAMP2P13473 410 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 GM2AP17900 193 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ME2P23368 584 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 HSPA7P48741 367 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 FOXA1P55317 472 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ERVPABLB-1P60509 514 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 EMX2Q04743 252 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 TMEM115Q12893 351 aaPredicted RBP16.02■□□□□ 0.16
LDB3-208ENST00000623007 ADAM15Q13444 863 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ENPP2Q13822 863 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 RCN1Q15293 331 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 PHKG1Q16816 387 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ZFP1Q6P2D0 407 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 FBXO15Q8NCQ5 510 aaPredicted RBP16.02■□□□□ 0.16
LDB3-208ENST00000623007 OR4F6Q8NGB9 312 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 SKA2Q8WVK7 121 aaPredicted RBP16.02■□□□□ 0.16
LDB3-208ENST00000623007 C3orf30Q96M34 536 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 FAM129BQ96TA1 746 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 GDF15Q99988 308 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 TUBB1Q9H4B7 451 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 CD248Q9HCU0 757 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 SPAG4Q9NPE6 437 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 AIG1Q9NVV5 245 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ADAMTS6Q9UKP5 1117 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 POMPQ9Y244 141 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 PIKFYVEQ9Y2I7 2098 aa16.02■□□□□ 0.16
LDB3-208ENST00000623007 ATP6AP2A0A1C7CYW4 349 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 OR7A17O14581 309 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 MRASO14807 208 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 TAPBPO15533 448 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 ATP6AP2O75787 350 aa16.02■□□□□ 0.15
LDB3-208ENST00000623007 CLDN9O95484 217 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms