RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 A8MU76 341 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 CAPZBP47756 277 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 THOC5Q13769 683 aaKnown RBP24.73■■□□□ 1.55
SURF1-205ENST00000615505 BRD3Q15059 726 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 ARHGAP22Q7Z5H3 698 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 RSC1A1Q92681 617 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 TFGQ92734 400 aaPredicted RBP24.73■■□□□ 1.55
SURF1-205ENST00000615505 SNF8Q96H20 258 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 C16orf45Q96MC5 204 aaPredicted RBP24.73■■□□□ 1.55
SURF1-205ENST00000615505 TRIM56Q9BRZ2 755 aaKnown RBP24.73■■□□□ 1.55
SURF1-205ENST00000615505 MVB12BQ9H7P6 319 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 KLHL3Q9UH77 587 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 SLC24A2Q9UI40 661 aa24.73■■□□□ 1.55
SURF1-205ENST00000615505 UBA6A0AVT1 1052 aaPredicted RBP24.72■■□□□ 1.55
SURF1-205ENST00000615505 SLC5A10A0PJK1 596 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 CDRT15L2A8MXV6 281 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 NDC80O14777 642 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 CAPN5O15484 640 aaPredicted RBP24.72■■□□□ 1.55
SURF1-205ENST00000615505 RRP8O43159 456 aaKnown RBP24.72■■□□□ 1.55
SURF1-205ENST00000615505 C9P02748 559 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 ITGB6P18564 788 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 ITIH1P19827 911 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 OGNP20774 298 aaKnown RBP24.72■■□□□ 1.55
SURF1-205ENST00000615505 RPS3P23396 243 aaKnown RBP eCLIP24.72■■□□□ 1.555e-7■■■□□ 17.8
SURF1-205ENST00000615505 PCBP4P57723 403 aaKnown RBP24.72■■□□□ 1.55
SURF1-205ENST00000615505 TYSND1Q2T9J0 566 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 MAATS1Q7Z4T9 603 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 CLEC14AQ86T13 490 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 PDZD3Q86UT5 571 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 PDIK1LQ8N165 341 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 AGGF1Q8N302 714 aaeCLIP24.72■■□□□ 1.55
SURF1-205ENST00000615505 ASZ1Q8WWH4 475 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 ZDHHC12Q96GR4 267 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 DCBLD2Q96PD2 775 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 TGM7Q96PF1 710 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 PANX3Q96QZ0 392 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 RAB33BQ9H082 229 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 P2RY12Q9H244 342 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 EPHA6Q9UF33 1036 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 VPS9D1Q9Y2B5 631 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 PCDHGA7Q9Y5G6 932 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 FREM2Q5SZK8 3169 aa24.72■■□□□ 1.55
SURF1-205ENST00000615505 URB1O60287 2271 aaKnown RBP24.72■■□□□ 1.55
SURF1-205ENST00000615505 ZCWPW2A0A1B0GU75 182 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 EFCAB8A8MWE9 144 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 PGAM1P18669 254 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 CCR7P32248 378 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 EIF2S3P41091 472 aaKnown RBP24.71■■□□□ 1.55
SURF1-205ENST00000615505 MAPK10P53779 464 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 EIF3BP55884 814 aaKnown RBP24.71■■□□□ 1.55
SURF1-205ENST00000615505 LONRF1Q17RB8 773 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 ZNF248Q8NDW4 579 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 ACVR1CQ8NER5 493 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 JPH3Q8WXH2 748 aaPredicted RBP24.71■■□□□ 1.55
SURF1-205ENST00000615505 C9orf72Q96LT7 481 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 NAT9Q9BTE0 207 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 TRIM31Q9BZY9 425 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 FAM169AQ9Y6X4 670 aa24.71■■□□□ 1.55
SURF1-205ENST00000615505 ANKRD11Q6UB99 2663 aaPredicted RBP24.71■■□□□ 1.55
SURF1-205ENST00000615505 FAM187AA6NFU0 413 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 IQCF5A8MTL0 148 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 KPNA5O15131 536 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 TOX3O15405 576 aaPredicted RBP24.7■■□□□ 1.54
SURF1-205ENST00000615505 TTC4O95801 387 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 APOA4P06727 396 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 CCL4P13236 92 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 ITGA8P53708 1063 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 GFERP55789 205 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 DHX9Q08211 1270 aaKnown RBP24.7■■□□□ 1.54
SURF1-205ENST00000615505 HSPA14Q0VDF9 509 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 TMED2Q15363 201 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 BBS9Q3SYG4 887 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 TMEM164Q5U3C3 297 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 HIBCHQ6NVY1 386 aaPredicted RBP24.7■■□□□ 1.54
SURF1-205ENST00000615505 IRGCQ6NXR0 463 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 NAPRTQ6XQN6 538 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 LRRC69Q6ZNQ3 347 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 CILP2Q8IUL8 1156 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 LMNTD2Q8IXW0 634 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.7■■□□□ 1.54
SURF1-205ENST00000615505 PHC3Q8NDX5 983 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 CALML6Q8TD86 181 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 EBNA1BP2Q99848 306 aaKnown RBP24.7■■□□□ 1.54
SURF1-205ENST00000615505 C20orf96Q9NUD7 363 aaPredicted RBP24.7■■□□□ 1.54
SURF1-205ENST00000615505 IL1RAPL1Q9NZN1 696 aa24.7■■□□□ 1.54
SURF1-205ENST00000615505 A0A087WV48 116 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 H3BMM5 538 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 NVLO15381 856 aaKnown RBP24.69■■□□□ 1.54
SURF1-205ENST00000615505 SEC31AO94979 1220 aaKnown RBP24.69■■□□□ 1.54
SURF1-205ENST00000615505 ANKRD34CP0C6C1 535 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 FGF3P11487 239 aaPredicted RBP24.69■■□□□ 1.54
SURF1-205ENST00000615505 FMO4P31512 558 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 SLC5A2P31639 672 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 ETV5P41161 510 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 CSE1LP55060 971 aaKnown RBP24.69■■□□□ 1.54
SURF1-205ENST00000615505 ADARP55265 1226 aaKnown RBP24.69■■□□□ 1.54
SURF1-205ENST00000615505 ZNF470Q6ECI4 717 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 ARMC6Q6NXE6 501 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 OOSP2Q86WS3 158 aa24.69■■□□□ 1.54
SURF1-205ENST00000615505 FAM129CQ86XR2 697 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms