RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 HDAC3O15379 428 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 UGT2B4P06133 528 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 CHRNGP07510 517 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NMBRP28336 390 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NR4A2P43354 598 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 HK2P52789 917 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PRKAA2P54646 552 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 YBEYP58557 167 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 FOXD4Q12950 439 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PRPSAP1Q14558 356 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 GRM3Q14832 879 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 LIPMQ5VYY2 423 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 IL31Q6EBC2 164 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 PARM1Q6UWI2 310 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 OTOP3Q7RTS5 596 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ARMC8Q8IUR7 673 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 CCDC28AQ8IWP9 274 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SPARTQ8N0X7 666 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 ABHD11Q8NFV4 315 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 OR13F1Q8NGS4 319 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SUSD6Q92537 303 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 FGF14Q92915 247 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 TP53INP1Q96A56 240 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 VAT1Q99536 393 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 GPR22Q99680 433 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 MCMBPQ9BTE3 642 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 SPON2Q9BUD6 331 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
FOXN3-219ENST00000615335 AKIP1Q9NQ31 210 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 NSMCE4AQ9NXX6 385 aa12.89□□□□□ -0.35
FOXN3-219ENST00000615335 DENND4AQ7Z401 1863 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 RGSL1A5PLK6 1076 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MAFKO60675 156 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 SAT1P21673 171 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 NUDT1P36639 197 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 ACVRL1P37023 503 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 GRIA4P48058 902 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 NUDT2P50583 147 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 RPL14P50914 215 aaKnown RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 NME5P56597 212 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 TJAP1Q5JTD0 557 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 RNF219Q5W0B1 726 aaPredicted RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 NAPEPLDQ6IQ20 393 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CXorf57Q6NSI4 855 aaKnown RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 VITQ6UXI7 678 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 SNX32Q86XE0 403 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 SIMC1Q8NDZ2 872 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 OR7D4Q8NG98 312 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 GRPEL2Q8TAA5 225 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 HLA-CQ95604 372 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 KXD1Q9BQD3 176 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MAGEH1Q9H213 219 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MRPL40Q9NQ50 206 aaKnown RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MRGBPQ9NV56 204 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 UBP1Q9NZI7 540 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CLEC4EQ9ULY5 219 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 GRXCR2A6NFK2 248 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 TK2O00142 265 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MAN1A2O60476 641 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 PIGNO95427 931 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CPNE6O95741 557 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 TYRP14679 529 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 NAGAP17050 411 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CCNCP24863 283 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CDH17Q12864 832 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 USP10Q14694 798 aaKnown RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 NPTX1Q15818 432 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 PCSK7Q16549 785 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 EML3Q32P44 896 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 AASDHQ4L235 1098 aaPredicted RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 KCTD8Q6ZWB6 473 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MFSD6LQ8IWD5 586 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 YAF2Q8IY57 180 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 PARP8Q8N3A8 854 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 KIAA1958Q8N8K9 716 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 WFDC5Q8TCV5 224 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 SDCCAG3Q96C92 435 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 MOCOSQ96EN8 888 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 ASIC4Q96FT7 647 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CNDP1Q96KN2 507 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 PPP1R36Q96LQ0 422 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 TEKT5Q96M29 485 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 SP110Q9HB58 689 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 C12orf4Q9NQ89 552 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 ACSS2Q9NR19 701 aa12.88□□□□□ -0.35
FOXN3-219ENST00000615335 EIF3LQ9Y262 564 aaKnown RBP12.88□□□□□ -0.35
FOXN3-219ENST00000615335 CCDC78A2IDD5 438 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 J3KR12 359 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 CCRL2O00421 344 aa12.87□□□□□ -0.35
FOXN3-219ENST00000615335 PSMD3O43242 534 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms