RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 LYSMD3Q7Z3D4 306 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 STK32CQ86UX6 486 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 OR4K2Q8NGD2 314 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ADAMTS19Q8TE59 1207 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TWIST2Q8WVJ9 160 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TMEM74Q96NL1 305 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 BBS2Q9BXC9 721 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SLC2A11Q9BYW1 496 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 RNF38Q9H0F5 515 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TUBB1Q9H4B7 451 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PALMDQ9NP74 551 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 NUDT4Q9NZJ9 180 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PCTPQ9UKL6 214 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 GPR45Q9Y5Y3 372 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 LRRC14BA6NHZ5 514 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 AQP12BA6NM10 295 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PPP6CO00743 305 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SOCS5O75159 536 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 LBPP18428 481 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 CCNA2P20248 432 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 IL10P22301 178 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 OR1D2P34982 312 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SGSHP51688 502 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 RPS24P62847 133 aaKnown RBP10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 LAPTM5Q13571 262 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 DEFB115Q30KQ5 88 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 RABL3Q5HYI8 236 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 BLOC1S3Q6QNY0 202 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PAQR3Q6TCH7 311 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 AQP12AQ8IXF9 295 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 CFAP52Q8N1V2 620 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 MIER2Q8N344 545 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 DHRSXQ8N5I4 330 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PSMA8Q8TAA3 256 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TBC1D15Q8TC07 691 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 CD200R1Q8TD46 325 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 GLMNQ92990 594 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ESAMQ96AP7 390 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 VWCEQ96DN2 955 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 C3orf30Q96M34 536 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 FEM1AQ9BSK4 669 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SLC8A2Q9UPR5 921 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 DHRS7Q9Y394 339 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 YIPF1Q9Y548 306 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 GPC6Q9Y625 555 aaPredicted RBP10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 DNAH12Q6ZR08 3092 aa10.69□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 KRBA1A5PL33 1030 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 A8MV72 311 aaPredicted RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 NOBOXO60393 691 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 NDUFS3O75489 264 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ECI2O75521 394 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 MSH3P20585 1137 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ZFP36L2P47974 494 aaKnown RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ECT2LQ008S8 904 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 BNIP2Q12982 314 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 LAPTM4AQ15012 233 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SF3B4Q15427 424 aaKnown RBP eCLIP10.68□□□□□ -0.79e-11■■■■■ 46.2
SENP3-EIF4A1-201ENST00000614237 C6orf10Q5SRN2 563 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ANKRD34AQ69YU3 496 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 HTR3DQ70Z44 454 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PTRH1Q86Y79 214 aaKnown RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 CROCCP3Q8IVE0 287 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 UBTD2Q8WUN7 234 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ACDQ96AP0 544 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 LMLNQ96KR4 655 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 NEURL2Q9BR09 285 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ZIM2Q9NZV7 527 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 EIF3FO00303 357 aaPredicted RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 RHOBTB1O94844 696 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 DLGAP3O95886 979 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 C7P10643 843 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 HSPA8P11142 646 aaKnown RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ITGB6P18564 788 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 SLC7A9P82251 487 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 OCA2Q04671 838 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 MERTKQ12866 999 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ZBED5Q49AG3 693 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 RNF219Q5W0B1 726 aaPredicted RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TMEM236Q5W0B7 351 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 IGFN1Q86VF2 1251 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 FBXO39Q8N4B4 442 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PACRGLQ8N7B6 248 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 ANKFN1Q8N957 763 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PDPRQ8NCN5 879 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PIH1D2Q8WWB5 315 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TRIM54Q9BYV2 358 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.68□□□□□ -0.73e-7■□□□□ 8.5
SENP3-EIF4A1-201ENST00000614237 DDX28Q9NUL7 540 aaKnown RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PKD2L2Q9NZM6 624 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 TNPO3Q9Y5L0 923 aaKnown RBP10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 DHRS12A0PJE2 317 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 UBXN8O00124 270 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 GNGT2O14610 69 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 PGLSO95336 258 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 OPRL1P41146 370 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 MLLT10P55197 1068 aa10.68□□□□□ -0.7
SENP3-EIF4A1-201ENST00000614237 CMTR2Q8IYT2 770 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms