RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 GSTM1P09488 218 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 FOLR1P15328 257 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 STIP1P31948 543 aaKnown RBP16.92■□□□□ 0.3
PRKN-209ENST00000612485 HSD11B2P80365 405 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 GSTM4Q03013 218 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 CACNG1Q06432 222 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 PRKAA1Q13131 559 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 C16orf46Q6P387 395 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
PRKN-209ENST00000612485 CDKN2AIPNLQ96HQ2 116 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 COG4Q9H9E3 785 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 KCND3Q9UK17 655 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 PADI1Q9ULC6 663 aa16.92■□□□□ 0.3
PRKN-209ENST00000612485 ERI2A8K979 691 aaKnown RBP16.91■□□□□ 0.3
PRKN-209ENST00000612485 MATN2O00339 956 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 ZBTB11O95625 1053 aaPredicted RBP16.91■□□□□ 0.3
PRKN-209ENST00000612485 GAS8O95995 478 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 EBLN1P0CF75 366 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
PRKN-209ENST00000612485 CD151P48509 253 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 CDKN1CP49918 316 aaPredicted RBP16.91■□□□□ 0.3
PRKN-209ENST00000612485 RPA4Q13156 261 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 KCNAB1Q14722 419 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 SKIDA1Q1XH10 827 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 TMTC4Q5T4D3 741 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 ATG14Q6ZNE5 492 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 D2HGDHQ8N465 521 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 TAB3Q8N5C8 712 aaPredicted RBP16.91■□□□□ 0.3
PRKN-209ENST00000612485 ACVR1CQ8NER5 493 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 RNF31Q96EP0 1072 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 FERD3LQ96RJ6 166 aa16.91■□□□□ 0.3
PRKN-209ENST00000612485 MRPS18BQ9Y676 258 aaKnown RBP16.91■□□□□ 0.3
PRKN-209ENST00000612485 QSOX1O00391 747 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 KRT86O43790 486 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 AP2A2O94973 939 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 ZIC2O95409 532 aaPredicted RBP16.9■□□□□ 0.3
PRKN-209ENST00000612485 F8A1P23610 371 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 FDFT1P37268 417 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 CDH17Q12864 832 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 LAMB3Q13751 1172 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 DEFB109BQ30KR1 87 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 DNAAF3Q8N9W5 541 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 OR4E2Q8NGC2 313 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 APOBEC4Q8WW27 367 aaKnown RBP16.9■□□□□ 0.3
PRKN-209ENST00000612485 LCN9Q8WX39 176 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 ATG4AQ8WYN0 398 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 OR52A5Q9H2C5 316 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 SRMSQ9H3Y6 488 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 LHX9Q9NQ69 397 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 FGF21Q9NSA1 209 aa16.9■□□□□ 0.3
PRKN-209ENST00000612485 PIH1D1Q9NWS0 290 aaKnown RBP16.9■□□□□ 0.3
PRKN-209ENST00000612485 SPTA1P02549 2419 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 MROH6A6NGR9 719 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 TERTO14746 1132 aaKnown RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 SUV39H1O43463 412 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 LIASO43766 372 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 KATNA1O75449 491 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 TIAF1O95411 115 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 PRSS56P0CW18 603 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 POLR2CP19387 275 aaPredicted RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 PSMA3P25788 255 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 MSNP26038 577 aaKnown RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 NSG1P42857 185 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 LMAN1P49257 510 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 KPNA2P52292 529 aaKnown RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 GSDMDP57764 484 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 TUBB4BP68371 445 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 NFKB2Q00653 900 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 TUBB2AQ13885 445 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 ITIH4Q14624 930 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 OASLQ15646 514 aaKnown RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 DBN1Q16643 649 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 PWWP2BQ6NUJ5 590 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 SLC13A5Q86YT5 568 aaPredicted RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 PIANPQ8IYJ0 282 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 OR52K1Q8NGK4 314 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 OR8K5Q8NH50 307 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRKN-209ENST00000612485 TUBB2BQ9BVA1 445 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 MVB12BQ9H7P6 319 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 SOHLH2Q9NX45 425 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 POMT2Q9UKY4 750 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 GUCA1BQ9UMX6 200 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 ZNF148Q9UQR1 794 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 BTRCQ9Y297 605 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 PCDHGA6Q9Y5G7 932 aa16.89■□□□□ 0.29
PRKN-209ENST00000612485 TLN1Q9Y490 2541 aaKnown RBP16.89■□□□□ 0.29
PRKN-209ENST00000612485 C21orf140B9A014 251 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 E7EVH7 732 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 RECKO95980 971 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 IFNB1P01574 187 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 CDH3P22223 829 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 ARCN1P48444 511 aaKnown RBP16.88■□□□□ 0.29
PRKN-209ENST00000612485 DNASE1L3Q13609 305 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 ZNF658BQ4V348 819 aaPredicted RBP16.88■□□□□ 0.29
PRKN-209ENST00000612485 ATP1A1-AS1Q5TC04 95 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 PPP1R21Q6ZMI0 780 aa16.88■□□□□ 0.29
PRKN-209ENST00000612485 CLDN19Q8N6F1 224 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms