RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CBLBQ13191 982 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ZMYND11Q15326 602 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 C4orf46Q504U0 113 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TUBA3EQ6PEY2 450 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 PLCZ1Q86YW0 608 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 OR6K6Q8NGW6 343 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 LENG8Q96PV6 779 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RGS17Q9UGC6 210 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 PRELID1Q9Y255 219 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF99A8MXY4 864 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SPAM1P38567 509 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SMAD3P84022 425 aaKnown RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ACAP2Q15057 778 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 KLHL22Q53GT1 634 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RALGPS1Q5JS13 557 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SDHAF4Q5VUM1 108 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 CES5AQ6NT32 575 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 PRR23CQ6ZRP0 262 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 AMIGO1Q86WK6 493 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 CCDC54Q8NEL0 328 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 KAT2AQ92830 837 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ANXA4P09525 319 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 HSPB3Q12988 150 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 IQCCQ4KMZ1 466 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TOP6BLQ8N6T0 577 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ZMIZ2Q8NF64 920 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TSPAN18Q96SJ8 248 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 IFT27Q9BW83 186 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 MIR1-1HGQ9H1L0 117 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 MFSD1Q9H3U5 465 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 IPPKQ9H8X2 491 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 PCDHGC3Q9UN70 934 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SLC22A2O15244 555 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 NAE1Q13564 534 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RFWD3Q6PCD5 774 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF781Q8N8C0 355 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SLC38A4Q969I6 547 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 FTHL17Q9BXU8 183 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RAI2Q9Y5P3 530 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 HOXC12P31275 282 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ACSL1P33121 698 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RASGEF1BQ0VAM2 473 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ZACNQ401N2 412 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TEX44Q53QW1 395 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SLC30A8Q8IWU4 369 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 MIA3Q5JRA6 1907 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 UBR1Q8IWV7 1749 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 IDH3AP50213 366 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 EIF5AP63241 154 aaKnown RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 IKBKEQ14164 716 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 DCLRE1AQ6PJP8 1040 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ANKS1BQ7Z6G8 1248 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 GALNT7Q86SF2 657 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF347Q96SE7 839 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 COMMD3Q9UBI1 195 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 F5P12259 2224 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 KERAO60938 352 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 NDST3O95803 873 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 YAP1P46937 504 aaKnown RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 COQ8BQ96D53 544 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 C8orf48Q96LL4 319 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RGPD8O14715 1765 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF3P17036 446 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 COLEC12Q5KU26 742 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 KLHDC10Q6PID8 442 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 ZDHHC21Q8IVQ6 265 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PIWIL1Q96J94 861 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 RC3H2Q9HBD1 1191 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 TIMM22Q9Y584 194 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 NAV1Q8NEY1 1877 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 NOMO1Q15155 1222 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 NOMO2Q5JPE7 1267 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PLD5Q8N7P1 536 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 DENND6BQ8NEG7 585 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 GPR152Q8TDT2 470 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF558Q96NG5 402 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 MED31Q9Y3C7 131 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 COLEC10Q9Y6Z7 277 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 DNM1LO00429 736 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 VSIG10LQ86VR7 867 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 SDR16C5Q8N3Y7 309 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CDT1Q9H211 546 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 PDPK1O15530 556 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 ACVR2AP27037 513 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 MON1BQ7L1V2 547 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 NUP54Q7Z3B4 507 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 OR5B17Q8NGF7 314 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 B3GNT4Q9C0J1 378 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 DDX4Q9NQI0 724 aaKnown RBP9.47□□□□□ -0.89
CSMD1-217ENST00000602723 CLCQ05315 142 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 SP140Q13342 867 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 C9orf131Q5VYM1 1079 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 SPATA9Q9BWV2 254 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 HMGXB4Q9UGU5 601 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 MYOM1P52179 1685 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 MAGEB17A8MXT2 336 aa9.47□□□□□ -0.89
CSMD1-217ENST00000602723 E9PAM4 449 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms