RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 SPRP35270 261 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 SLC19A1P41440 591 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CLCN7P51798 805 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 PMS2P54278 862 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 GPLD1P80108 840 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 SQSTM1Q13501 440 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 GBX1Q14549 363 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CLCA4Q14CN2 919 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 SMAD1Q15797 465 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 SEPT7Q16181 437 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 KLHL38Q2WGJ6 581 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 ZNF549Q6P9A3 640 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 EMBQ6PCB8 327 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CAPN12Q6ZSI9 719 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 EFL1Q7Z2Z2 1120 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CTAGE3PQ8IX95 158 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CACTIN-AS1Q8N1I8 211 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 ZBTB2Q8N680 514 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 IFI44Q8TCB0 444 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 INPP5DQ92835 1189 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 VPS39Q96JC1 886 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 DPYSL5Q9BPU6 564 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 TXLNGYQ9BZA5 131 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 WWP1Q9H0M0 922 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 POPDC3Q9HBV1 291 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 TOR4AQ9NXH8 423 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 ZNF624Q9P2J8 865 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 POLG2Q9UHN1 485 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 CDYLQ9Y232 598 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 WDR37Q9Y2I8 494 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 VWA7Q9Y334 891 aa16.19■□□□□ 0.18
SHKBP1-219ENST00000599575 ARID1BQ8NFD5 2236 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 IQCF5A8MTL0 148 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 NIPSNAP2O75323 286 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 TCEA3O75764 348 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 FTH1P19P0C7X4 201 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 ACADLP28330 430 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 POU4F1Q01851 419 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 DNAJC3Q13217 504 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 GUSBP11Q6P575 273 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 KLHL35Q6PF15 583 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 UNC5DQ6UXZ4 953 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 KRT222Q8N1A0 295 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 NAT14Q8WUY8 206 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 TFGQ92734 400 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 GRAMD1AQ96CP6 724 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 TSPAN17Q96FV3 270 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 C12orf66Q96MD2 445 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 FOPNLQ96NB1 174 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 INSM2Q96T92 566 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 SLC38A3Q99624 504 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 RBBP8Q99708 897 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 ABCG4Q9H172 646 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 SCHIP1Q9P0W5 487 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 FETUBQ9UGM5 382 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 RABGEF1Q9UJ41 708 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 TRMT6Q9UJA5 497 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 PSMD13Q9UNM6 376 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 MED16Q9Y2X0 877 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 PSAT1Q9Y617 370 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 RNF215Q9Y6U7 377 aa16.18■□□□□ 0.18
SHKBP1-219ENST00000599575 SPTBN4Q9H254 2564 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 DCDC2BA2VCK2 349 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 OR52A4PA6NMU1 304 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PPM1DO15297 605 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 ACSL3O95573 720 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PDHA2P29803 388 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 CCNFP41002 786 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PREPP48147 710 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 RGS4P49798 205 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 MAZP56270 477 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 KRT33BQ14525 404 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 ERCC6LQ2NKX8 1250 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 TMEM26Q6ZUK4 368 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 CCDC91Q7Z6B0 441 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 TBC1D21Q8IYX1 336 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 LILRA3Q8N6C8 439 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PPM1NQ8N819 430 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PHC3Q8NDX5 983 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 LKAAEAR1Q8TD35 194 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 MAGEC3Q8TD91 643 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PATE1Q8WXA2 126 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 ADAMTS14Q8WXS8 1223 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 CCDC74AQ96AQ1 378 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 RMDN2Q96LZ7 410 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 CCDC3Q9BQI4 270 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 CCDC77Q9BR77 488 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 KIR3DX1Q9H7L2 352 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 PPCSQ9HAB8 311 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 SMYD2Q9NRG4 433 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 IMP3Q9NV31 184 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 FAM8A1Q9UBU6 413 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 RAB21Q9UL25 225 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 IKBKGQ9Y6K9 419 aa16.17■□□□□ 0.18
SHKBP1-219ENST00000599575 SPAARA0A1B0GVQ0 90 aa16.16■□□□□ 0.18
SHKBP1-219ENST00000599575 FAM221BA6H8Z2 402 aa16.16■□□□□ 0.18
SHKBP1-219ENST00000599575 CXorf49A8MYA2 514 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-219ENST00000599575 RIPK2O43353 540 aa16.16■□□□□ 0.18
SHKBP1-219ENST00000599575 FAM153BP0C7A2 387 aa16.16■□□□□ 0.18
SHKBP1-219ENST00000599575 ITGB6P18564 788 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms