RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 IL22Q9GZX6 179 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 RAB33BQ9H082 229 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 OR52A5Q9H2C5 316 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 HRASLS2Q9NWW9 162 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 ANAPC5Q9UJX4 755 aa22.04■■□□□ 1.12
CCDC9-204ENST00000599398 OR1I1O60431 355 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 KRT14P02533 472 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 FTH1P02794 183 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 OR56A5P0C7T3 313 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 TPSB2P20231 275 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 NPY2RP49146 381 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 RPA4Q13156 261 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 BRD3Q15059 726 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 TPSAB1Q15661 275 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 ZNF658BQ4V348 819 aaPredicted RBP22.03■■□□□ 1.12
CCDC9-204ENST00000599398 DNTTIP2Q5QJE6 756 aaKnown RBP22.03■■□□□ 1.12
CCDC9-204ENST00000599398 ARMC6Q6NXE6 501 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 TTC27Q6P3X3 843 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 CERS6Q6ZMG9 384 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 ZNF534Q76KX8 674 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 IL22RA1Q8N6P7 574 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 COG1Q8WTW3 980 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 OSBPL9Q96SU4 736 aa22.03■■□□□ 1.12
CCDC9-204ENST00000599398 SIDT1Q9NXL6 827 aaKnown RBP22.03■■□□□ 1.12
CCDC9-204ENST00000599398 TCRBV7S3A2A0A539 114 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 OR6C74A6NCV1 312 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 OR5K3A6NET4 321 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 EFSO43281 561 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 MGAT1P26572 445 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 PPARGP37231 505 aaPredicted RBP22.02■■□□□ 1.12
CCDC9-204ENST00000599398 CD151P48509 253 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 SH3BP2P78314 561 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 CDK16Q00536 496 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 RHDQ02161 417 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 BOP1Q14137 746 aaKnown RBP22.02■■□□□ 1.12
CCDC9-204ENST00000599398 SYTL3Q4VX76 610 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 KIAA1614Q5VZ46 1190 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 CACNA2D3Q8IZS8 1091 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 PHC3Q8NDX5 983 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 ACVR1CQ8NER5 493 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 OR4E2Q8NGC2 313 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 SNRNP27Q8WVK2 155 aaKnown RBP22.02■■□□□ 1.12
CCDC9-204ENST00000599398 NKD1Q969G9 470 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 OR6C1Q96RD1 312 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 CATSPERZQ9NTU4 200 aa22.02■■□□□ 1.12
CCDC9-204ENST00000599398 UBA6A0AVT1 1052 aaPredicted RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 F8W8V4 182 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 LIN7AO14910 233 aaPredicted RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 RAD1O60671 282 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 ITGB6P18564 788 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 COILP38432 576 aaPredicted RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 ARCN1P48444 511 aaKnown RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 SARNPP82979 210 aaKnown RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 SEMA3AQ14563 771 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 AARS2Q5JTZ9 985 aaKnown RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 LRRC8BQ6P9F7 803 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 CCDC137Q6PK04 289 aaKnown RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 NAPRTQ6XQN6 538 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 LDB1Q86U70 411 aaPredicted RBP22.01■■□□□ 1.11
CCDC9-204ENST00000599398 LCN9Q8WX39 176 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 KLHL6Q8WZ60 621 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 UBXN4Q92575 508 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 MAP3K3Q99759 626 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 SYBUQ9NX95 663 aa22.01■■□□□ 1.11
CCDC9-204ENST00000599398 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22■■□□□ 1.11
CCDC9-204ENST00000599398 IGHV5-51A0A0C4DH38 117 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 STK17BO94768 372 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 POLR2CP19387 275 aaPredicted RBP22■■□□□ 1.11
CCDC9-204ENST00000599398 NMBRP28336 390 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 ARL4DP49703 201 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 PRKAA1Q13131 559 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 KCNJ11Q14654 390 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 TAF1BQ53T94 588 aaPredicted RBP22■■□□□ 1.11
CCDC9-204ENST00000599398 OTUD6BQ8N6M0 293 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 ZSCAN1Q8NBB4 408 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 TFGQ92734 400 aaPredicted RBP22■■□□□ 1.11
CCDC9-204ENST00000599398 RNF31Q96EP0 1072 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 SGSM3Q96HU1 749 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 ELMO2Q96JJ3 720 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 CD180Q99467 661 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 HGH1Q9BTY7 390 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 SRMSQ9H3Y6 488 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 MVB12BQ9H7P6 319 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 TREX1Q9NSU2 369 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 PILRAQ9UKJ1 303 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 SNX12Q9UMY4 172 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 ATMQ13315 3056 aa22■■□□□ 1.11
CCDC9-204ENST00000599398 GOLGA6L10A0A0M3HER8 536 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 TLCD2A6NGC4 264 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 ERVH48-1M5A8F1 160 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 ATXN7O15265 892 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-204ENST00000599398 CD3EAPO15446 510 aaKnown RBP21.99■■□□□ 1.11
CCDC9-204ENST00000599398 NELFEP18615 380 aaKnown RBP21.99■■□□□ 1.11
CCDC9-204ENST00000599398 CSE1LP55060 971 aaKnown RBP21.99■■□□□ 1.11
CCDC9-204ENST00000599398 PRKG2Q13237 762 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 CYP1B1Q16678 543 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 RASGRP3Q8IV61 690 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 NLGN4XQ8N0W4 816 aa21.99■■□□□ 1.11
CCDC9-204ENST00000599398 SIDT2Q8NBJ9 832 aaKnown RBP21.99■■□□□ 1.11
CCDC9-204ENST00000599398 NLGN4YQ8NFZ3 816 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms