RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 KRT33BQ14525 404 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 BRD3Q15059 726 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 PLCL1Q15111 1095 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 RNASEH2BQ5TBB1 312 aaKnown RBP8.97□□□□□ -0.97
DNMT1-223ENST00000591239 DUS1LQ6P1R4 473 aaKnown RBP8.97□□□□□ -0.97
DNMT1-223ENST00000591239 KLHL35Q6PF15 583 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 LDB1Q86U70 411 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-223ENST00000591239 FAM129CQ86XR2 697 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 SPACA3Q8IXA5 215 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 KLHL7Q8IXQ5 586 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 C17orf53Q8N3J3 647 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-223ENST00000591239 JPH3Q8WXH2 748 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-223ENST00000591239 ELMO1Q92556 727 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 USP7Q93009 1102 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 ZDHHC12Q96GR4 267 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 C9orf72Q96LT7 481 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 TGM7Q96PF1 710 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 DPH1Q9BZG8 443 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 B3GNT4Q9C0J1 378 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 RAB33BQ9H082 229 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 KIR3DX1Q9H7L2 352 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 SAMD15Q9P1V8 674 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 RNF14Q9UBS8 474 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 EPHA6Q9UF33 1036 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 ASIC3Q9UHC3 531 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 ACSL6Q9UKU0 697 aa8.97□□□□□ -0.97
DNMT1-223ENST00000591239 FAM237BA0A1B0GVD1 139 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 SLC5A10A0PJK1 596 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 EFCAB7A8K855 629 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 B4E171 279 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 C9orf172C9J069 976 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 GOLGA8KD6RF30 607 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 GOLGA8TH3BQL2 631 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 DNALI1O14645 258 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 PRMT5O14744 637 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TOX3O15405 576 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 KLK10O43240 276 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 NDUFS3O75489 264 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 RASSF9O75901 435 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ANKRD34CP0C6C1 535 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ITGB6P18564 788 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 PAMP19021 973 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 IVDP26440 423 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TSPAN7P41732 249 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ABCG1P45844 678 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 LEPRP48357 1165 aaKnown RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ARCN1P48444 511 aaKnown RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 DR1Q01658 176 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 PLOD1Q02809 727 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TLE3Q04726 772 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 BOP1Q14137 746 aaKnown RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 COL28A1Q2UY09 1125 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ANKRD20A4Q4UJ75 823 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TMEM164Q5U3C3 297 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 KIAA0930Q6ICG6 404 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 MRNIPQ6NTE8 343 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 IRGCQ6NXR0 463 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 NAPRTQ6XQN6 538 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 SYDE1Q6ZW31 735 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 PCGF5Q86SE9 256 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 SDCCAG8Q86SQ7 713 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TMEM135Q86UB9 458 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 PDZD3Q86UT5 571 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 OTUD6BQ8N6M0 293 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 BMPERQ8N8U9 685 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 PHC3Q8NDX5 983 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 KCNE4Q8WWG9 221 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TFGQ92734 400 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ART4Q93070 314 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 RUNDC3BQ96NL0 473 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 FCRL3Q96P31 734 aaPredicted RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TAAR9Q96RI9 348 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 FERD3LQ96RJ6 166 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TRIM56Q9BRZ2 755 aaKnown RBP8.96□□□□□ -0.98
DNMT1-223ENST00000591239 CARD6Q9BX69 1037 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 TSSK1BQ9BXA7 367 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 MVB12BQ9H7P6 319 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 OCIAD1Q9NX40 245 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 SLC39A1Q9NY26 324 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 FOXJ2Q9P0K8 574 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 SLC24A2Q9UI40 661 aa8.96□□□□□ -0.98
DNMT1-223ENST00000591239 ZFYVE26Q68DK2 2539 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 AHCTF1Q8WYP5 2266 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 UBA6A0AVT1 1052 aaPredicted RBP8.95□□□□□ -0.98
DNMT1-223ENST00000591239 OR6C74A6NCV1 312 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 OR5K3A6NET4 321 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 IQCF5A8MTL0 148 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 BHMG1C9JSJ3 638 aaPredicted RBP8.95□□□□□ -0.98
DNMT1-223ENST00000591239 CCDC188H7C350 402 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 PFDN6O15212 129 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 KIF1CO43896 1103 aaKnown RBP8.95□□□□□ -0.98
DNMT1-223ENST00000591239 AOAHP28039 575 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 ACADLP28330 430 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 CASQ1P31415 396 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 CCR7P32248 378 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 SEPHS1P49903 392 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 CSE1LP55060 971 aaKnown RBP8.95□□□□□ -0.98
DNMT1-223ENST00000591239 RAB15P59190 212 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 PPP1CAP62136 330 aa8.95□□□□□ -0.98
DNMT1-223ENST00000591239 ETF1P62495 437 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms