RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 C19orf18Q8NEA5 215 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 POPDC3Q9HBV1 291 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 CLDN25C9JDP6 229 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 AURKAO14965 403 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 UGT2B4P06133 528 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 PPIBP23284 216 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 GABRR2P28476 465 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 GGT5P36269 586 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 DGKKQ5KSL6 1271 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 PGAP3Q96FM1 320 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 RANBP9Q96S59 729 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 CORO1BQ9BR76 489 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 TMEM245Q9H330 911 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 KCNE2Q9Y6J6 123 aa16.85■□□□□ 0.29
SMARCA4-215ENST00000590574 ALOX5P09917 674 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 GRK3P35626 688 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 NFKB2Q00653 900 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 CSGALNACT1Q8TDX6 532 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 CNOT11Q9UKZ1 510 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 PRPS2P11908 318 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 MYL12AP19105 171 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 NANOGP8Q6NSW7 305 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 LYSMD3Q7Z3D4 306 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 UMODL1-AS1Q8N2C9 162 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 ANKRD49Q8WVL7 239 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 IGSF8Q969P0 613 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 NANOGQ9H9S0 305 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 DNAJC15Q9Y5T4 150 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 ANKDD1BA6NHY2 528 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 TSPAN19P0C672 248 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 CHIT1Q13231 466 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 UBXN11Q5T124 520 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 PPP4R4Q6NUP7 873 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 ASZ1Q8WWH4 475 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 CAPN10Q9HC96 672 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 A0A1W2PPW3 197 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 STX16O14662 325 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 IL7RP16871 459 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 ALDH3A2P51648 485 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 RPS7P62081 194 aaKnown RBP16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 SH3BP2P78314 561 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 OR4D1Q15615 310 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 ZBTB6Q15916 424 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 FBXO22Q8NEZ5 403 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 OR52J3Q8NH60 311 aa16.84■□□□□ 0.29
SMARCA4-215ENST00000590574 ANKRD66B4E2M5 251 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 OR1I1O60431 355 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 SNAP29O95721 258 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 GDF5P43026 501 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 GSTM5P46439 218 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 TRIM32Q13049 653 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 TRIM40Q6P9F5 258 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 FBXL19Q6PCT2 694 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 SNX20Q7Z614 316 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 CYP4Z2PQ8N1L4 340 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 TMEM199Q8N511 208 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 NAT16Q8N8M0 369 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 HTRA1Q92743 480 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 SOCS7O14512 581 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 SPATS1Q496A3 300 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 TMC5Q6UXY8 1006 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 RAVER1Q8IY67 606 aaKnown RBP16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 PPCDCQ96CD2 204 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 PRICKLE1Q96MT3 831 aaPredicted RBP16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 PRRG3Q9BZD7 231 aa16.83■□□□□ 0.29
SMARCA4-215ENST00000590574 MAGEB17A8MXT2 336 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 SELPP16109 830 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 MAGP20916 626 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 TGFBIQ15582 683 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 HACD2Q6Y1H2 254 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 UTS2BQ765I0 119 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 SYVN1Q86TM6 617 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 ANKFN1Q8N957 763 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 CAPSLQ8WWF8 208 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 RAD18Q9NS91 495 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 HMX2A2RU54 273 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 TNFRSF11BO00300 401 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 ELK4P28324 431 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 ENTPD1P49961 510 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 CRNNQ9UBG3 495 aaPredicted RBP16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 BTBD3Q9Y2F9 522 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 ILVBLA1L0T0 632 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 H0YJX3 145 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 RASAL1O95294 804 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 FDXRP22570 491 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 CSKP41240 450 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 SFSWAPQ12872 951 aaKnown RBP16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 ISCA2Q86U28 154 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 BBS4Q96RK4 519 aa16.83■□□□□ 0.28
SMARCA4-215ENST00000590574 CTSKP43235 329 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 CDKL1Q00532 357 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 NAE1Q13564 534 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 RANBP10Q6VN20 620 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 PTCHD4Q6ZW05 846 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 R3HCC1LQ7Z5L2 792 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 RHEBL1Q8TAI7 183 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 SLC45A3Q96JT2 553 aa16.82■□□□□ 0.28
SMARCA4-215ENST00000590574 RPL10LQ96L21 214 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms