RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 SPATA17Q96L03 361 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 HNRNPABQ99729 332 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 DPCDQ9BVM2 203 aaPredicted RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 ZNF768Q9H5H4 540 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 KIF9Q9HAQ2 790 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 ACP6Q9NPH0 428 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 HPS4Q9NQG7 708 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 LIMA1Q9UHB6 759 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 CAMK2AQ9UQM7 478 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 NEUROG3Q9Y4Z2 214 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 ASH1LQ9NR48 2969 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 TBC1D3DA0A087WVF3 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3IA0A087WXS9 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3EA0A087X179 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3KA0A087X1G2 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 CCDC187A0A096LP49 1063 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3BA6NDS4 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3FA6NER0 549 aaPredicted RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 BECN2A8MW95 431 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3LB9A6J9 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 HHLA1C9JL84 531 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 PSMD9O00233 223 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 EPHB6O15197 1021 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 SPRY2O43597 315 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 GUCY1B2O75343 617 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TOP3BO95985 862 aaKnown RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3HP0C7X1 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TRIM21P19474 475 aaKnown RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 AVPR1AP37288 418 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 LIPAP38571 399 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 USP8P40818 1118 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 PGFP49763 221 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 MFAP3P55082 362 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 ARF3P61204 181 aaPredicted RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 ARF1P84077 181 aaKnown RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TAF10Q12962 218 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 RUNX3Q13761 415 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 PMS2CLQ68D20 193 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 ARHGAP17Q68EM7 881 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TXNDC8Q6A555 127 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3GQ6DHY5 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3CQ6IPX1 549 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 P3H2Q8IVL5 708 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D3Q8IZP1 549 aaPredicted RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 CMTM8Q8IZV2 173 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 MAB21L3Q8N8X9 362 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 RPLP0P6Q8NHW5 317 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 UBA3Q8TBC4 463 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 CTHRC1Q96CG8 243 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 R3HDM4Q96D70 268 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 SLC22A12Q96S37 553 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 EBF3Q9H4W6 596 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 FAM124BQ9H5Z6 455 aaPredicted RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 CSNK1G1Q9HCP0 422 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TRPC7Q9HCX4 862 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 AKIP1Q9NQ31 210 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 GKN1Q9NS71 199 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 UXTQ9UBK9 157 aaPredicted RBP7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TBC1D29Q9UFV1 150 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 DNAJC12Q9UKB3 198 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 TSPAN16Q9UKR8 245 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 ADAMTS20P59510 1910 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 ACACAQ13085 2346 aa7.77□□□□□ -1.17
ATG4D-210ENST00000588972 ABCA7Q8IZY2 2146 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 FAM170AA1A519 330 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 GAGE12BA1L429 117 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 GAGE12HA6NDE8 117 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 OTOL1A6NHN0 477 aaPredicted RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 SMTNL1A8MU46 457 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 M0QYV0 167 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 O00370 1275 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 RNASET2O00584 256 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 CDX4O14627 284 aaPredicted RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 MUSKO15146 869 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 PLATP00750 562 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 TPM2P07951 284 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 PAEPP09466 180 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 VDRP11473 427 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 ARSAP15289 507 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 MMP8P22894 467 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 DDX6P26196 483 aaKnown RBP eCLIP7.76□□□□□ -1.177e-8■■□□□ 12.4
ATG4D-210ENST00000588972 YWHAQP27348 245 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 GRK5P34947 590 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 HOXD12P35452 270 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 FOXL2P58012 376 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 UBXN1Q04323 297 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 TBL3Q12788 808 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 LMAN2Q12907 356 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 THOC5Q13769 683 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 DMC1Q14565 340 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 PDGFRLQ15198 375 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 SYCP1Q15431 976 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 TBCEQ15813 527 aaPredicted RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 KIAA1324Q6UXG2 1013 aaKnown RBP7.76□□□□□ -1.17
ATG4D-210ENST00000588972 DPY19L3Q6ZPD9 716 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 PIGZQ86VD9 579 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 NUP93Q8N1F7 819 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 Q8N3U1 123 aa7.76□□□□□ -1.17
ATG4D-210ENST00000588972 LSMEM1Q8N8F7 131 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms