RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 ATG14Q6ZNE5 492 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 GALNT7Q86SF2 657 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CNTN4Q8IWV2 1026 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CACNA2D3Q8IZS8 1091 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CYP4X1Q8N118 509 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 MPP5Q8N3R9 675 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 ANKRD42Q8N9B4 389 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 BANPQ8N9N5 519 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 RAB3IL1Q8TBN0 382 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 LRRC8CQ8TDW0 803 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CKAP2Q8WWK9 683 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 PATE1Q8WXA2 126 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 ASB12Q8WXK4 309 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 ISG20Q96AZ6 181 aaKnown RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 TADA1Q96BN2 335 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 MRGPRX2Q96LB1 330 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 TSNARE1Q96NA8 513 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CCT8L2Q96SF2 557 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 RBBP8Q99708 897 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 C19orf43Q9BQ61 176 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 LGR4Q9BXB1 951 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 STRADBQ9C0K7 418 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 TMEM168Q9H0V1 697 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 VPS11Q9H270 941 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 FGF22Q9HCT0 170 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 PCDH12Q9NPG4 1184 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 HACD3Q9P035 362 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 LHX3Q9UBR4 397 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 DCDC2Q9UHG0 476 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 MOSPD1Q9UJG1 213 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 CORO1CQ9ULV4 474 aaPredicted RBP7.73□□□□□ -1.17
VMP1-204ENST00000587259 PCDHGA7Q9Y5G6 932 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 LRP4O75096 1905 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 BSNQ9UPA5 3926 aa7.73□□□□□ -1.17
VMP1-204ENST00000587259 A0A0U1RQS6 177 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 ZCWPW2A0A1B0GU75 182 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 LOC285095A0A1B0GVY8 99 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 A0A1W2PQ67 120 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 F5H423 210 aaPredicted RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 J3KR12 359 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 PFDN6O15212 129 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 B4GAT1O43505 415 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 ASMTLO95671 621 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CRTAMO95727 393 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 NDST3O95803 873 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 MT-CYBP00156 380 aaPredicted RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 APOA4P06727 396 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 VIMP08670 466 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 ALPIP09923 528 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CCKBRP32239 447 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CRHR1P34998 444 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CD86P42081 329 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 GCGRP47871 477 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 LIG3P49916 1009 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 LIMK2P53671 638 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 OR1D5P58170 312 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 RPL26P61254 145 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 YPEL5P62699 121 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CDK18Q07002 472 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 ZFP36L1Q07352 338 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 MTM1Q13496 603 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 THOC5Q13769 683 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 GRM3Q14832 879 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 PTPRRQ15256 657 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 ELOCQ15369 112 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CYTH1Q15438 398 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 SLC1A5Q15758 541 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 NKAIN2Q5VXU1 208 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 TRMT10BQ6PF06 316 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 ZNF574Q6ZN55 896 aaPredicted RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 SPRED1Q7Z699 444 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 TAF8Q7Z7C8 310 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 CAMK1DQ8IU85 385 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 SLITRK4Q8IW52 837 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 C4orf33Q8N1A6 199 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 FAM46DQ8NEK8 389 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 GPR156Q8NFN8 814 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 SPATA22Q8NHS9 363 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 ZNF473Q8WTR7 871 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 ISL2Q96A47 359 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 RAB7BQ96AH8 199 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 MRRFQ96E11 262 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 NSMCE3Q96MG7 304 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 ZNF317Q96PQ6 595 aaPredicted RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 NUDCD1Q96RS6 583 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 SEMA3CQ99985 751 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 NUDT22Q9BRQ3 303 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 RHOJQ9H4E5 214 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 C20orf96Q9NUD7 363 aaPredicted RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 TMEM9Q9P0T7 183 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 LRIT1Q9P2V4 623 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 GRID1Q9ULK0 1009 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 RPL26L1Q9UNX3 145 aaKnown RBP7.72□□□□□ -1.17
VMP1-204ENST00000587259 UNC13CQ8NB66 2214 aa7.72□□□□□ -1.17
VMP1-204ENST00000587259 PIKFYVEQ9Y2I7 2098 aa7.71□□□□□ -1.17
VMP1-204ENST00000587259 ERICH4A6NGS2 130 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 KLF11O14901 512 aa7.71□□□□□ -1.18
VMP1-204ENST00000587259 NVLO15381 856 aaKnown RBP7.71□□□□□ -1.18
VMP1-204ENST00000587259 BIRC5O15392 142 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms