RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CACNA2D3Q8IZS8 1091 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 RBFAQ8N0V3 343 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 OTUD6BQ8N6M0 293 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 BANPQ8N9N5 519 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 LMX1AQ8TE12 382 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF473Q8WTR7 871 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 MZB1Q8WU39 189 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 CCT8L2Q96SF2 557 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 RBBP8Q99708 897 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 LRRC61Q9BV99 259 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 ATXN10Q9UBB4 475 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 TMPRSS11EQ9UL52 423 aa13.27□□□□□ -0.29
CSNK1D-220ENST00000581737 IGLV3-16A0A075B6K0 115 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 A0A087WV48 116 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 ZCWPW2A0A1B0GU75 182 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 KLHL33A6NCF5 533 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 LMO7DNF2Z398 122 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 QSOX1O00391 747 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 KMOO15229 486 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 CD3EAPO15446 510 aaKnown RBP13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GPR39O43194 453 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GRID2O43424 1007 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 ZFC3H1O60293 1989 aaKnown RBP13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 DNAJC6O75061 913 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 KIAA0754O94854 1291 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 C1QAP02745 245 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GSTA1P08263 222 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 ITGA2BP08514 1039 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 PYGBP11216 843 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNF8P17098 575 aaPredicted RBP13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 VCLP18206 1134 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 PTPRBP23467 1997 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 ITPKBP27987 946 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 LIMK2P53671 638 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 CLDN6P56747 220 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 PDK4Q16654 411 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 INSCQ1MX18 579 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 PYCR3Q53H96 274 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 TAF1BQ53T94 588 aaPredicted RBP13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 RNF187Q5TA31 235 aaPredicted RBP13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 LVRNQ6Q4G3 990 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 CES3Q6UWW8 571 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 STRA8Q7Z7C7 330 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 LRRTM4Q86VH4 590 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GKN2Q86XP6 184 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 TRAPPC5Q8IUR0 188 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 RAB3IL1Q8TBN0 382 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 RHBDD1Q8TEB9 315 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 SAP25Q8TEE9 199 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 DUSP23Q9BVJ7 150 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GSDMCQ9BYG8 508 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 VPS11Q9H270 941 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 FAM96AQ9H5X1 160 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 MRPL40Q9NQ50 206 aaKnown RBP13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 DCDC2Q9UHG0 476 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 ZNHIT2Q9UHR6 403 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 KLF15Q9UIH9 416 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GRID1Q9ULK0 1009 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 DOLKQ9UPQ8 538 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 VPS9D1Q9Y2B5 631 aa13.26□□□□□ -0.29
CSNK1D-220ENST00000581737 GOLGA4Q13439 2230 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 PIKFYVEQ9Y2I7 2098 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 A0A1W2PPM1 405 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 OR51F1A6NGY5 319 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 EIF4E1BA6NMX2 242 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CXorf49A8MYA2 514 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TPP1O14773 563 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CHUKO15111 745 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 SCAMP1O15126 338 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 SDC3O75056 442 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 MTX2O75431 263 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 AP2A2O94973 939 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 APOA4P06727 396 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 ANXA6P08133 673 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 ERVK-10P10266 1014 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 OGNP20774 298 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TYK2P29597 1187 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CRHR1P34998 444 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 NSG1P42857 185 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 SLC12A2P55011 1212 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 KHDC1Q4VXA5 237 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TEDDM1Q5T9Z0 273 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 ATG16L1Q676U5 607 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 NEPROQ6NW34 567 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CRTC3Q6UUV7 619 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 GALNT7Q86SF2 657 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CNTN4Q8IWV2 1026 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 PIANPQ8IYJ0 282 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 CCDC197Q8NCU1 140 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 GPR150Q8NGU9 434 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TCP10LQ8TDR4 215 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TSPAN17Q96FV3 270 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 DCBLD2Q96PD2 775 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TCF12Q99081 682 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TIMM29Q9BSF4 260 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 TCEAL2Q9H3H9 227 aaPredicted RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 RHOJQ9H4E5 214 aa13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 IARS2Q9NSE4 1012 aaKnown RBP13.25□□□□□ -0.29
CSNK1D-220ENST00000581737 EVA1BQ9NVM1 165 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms