RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 SLC40A1Q9NP59 571 aa22.23■■□□□ 1.15
NDEL1-207ENST00000580012 FAM8A1Q9UBU6 413 aa22.23■■□□□ 1.15
NDEL1-207ENST00000580012 GOLGA4Q13439 2230 aaKnown RBP22.23■■□□□ 1.15
NDEL1-207ENST00000580012 NCOR2Q9Y618 2525 aa22.23■■□□□ 1.15
NDEL1-207ENST00000580012 APOA4P06727 396 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 SLC35G4P0C7Q5 338 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 GPR3P46089 330 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 E2F1Q01094 437 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 HSPA14Q0VDF9 509 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 ERCC6LQ2NKX8 1250 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 TRMT10CQ7L0Y3 403 aaKnown RBP22.22■■□□□ 1.15
NDEL1-207ENST00000580012 OTOAQ7RTW8 1153 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 VRK3Q8IV63 474 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 ZFPM2Q8WW38 1151 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 CCDC74AQ96AQ1 378 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 TMEM159Q96B96 161 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 CPNE1Q99829 537 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 CCDC68Q9H2F9 335 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 POT1Q9NUX5 634 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 APOBEC2Q9Y235 224 aaKnown RBP22.22■■□□□ 1.15
NDEL1-207ENST00000580012 VWA7Q9Y334 891 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 DHRS7Q9Y394 339 aa22.22■■□□□ 1.15
NDEL1-207ENST00000580012 ARHGEF17Q96PE2 2063 aaPredicted RBP22.22■■□□□ 1.15
NDEL1-207ENST00000580012 B4GAT1O43505 415 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 RFPL3O75679 317 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 MTHFD1P11586 935 aaKnown RBP22.21■■□□□ 1.15
NDEL1-207ENST00000580012 PHBP35232 272 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 VSNL1P62760 191 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 HHEXQ03014 270 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 NAB1Q13506 487 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 BOP1Q14137 746 aaKnown RBP22.21■■□□□ 1.15
NDEL1-207ENST00000580012 BRD3Q15059 726 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 PPM1JQ5JR12 505 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 RBM20Q5T481 1227 aaKnown RBP22.21■■□□□ 1.15
NDEL1-207ENST00000580012 PDZD3Q86UT5 571 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 RBM12BQ8IXT5 1001 aaKnown RBP22.21■■□□□ 1.15
NDEL1-207ENST00000580012 GIMAP7Q8NHV1 300 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 SH3KBP1Q96B97 665 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 NDNQ99608 321 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 SLC30A3Q99726 388 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 RHOJQ9H4E5 214 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 ACSS3Q9H6R3 686 aa22.21■■□□□ 1.15
NDEL1-207ENST00000580012 PRAMEF33A0A0G2JMD5 474 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 RHPN2P1A8MT19 583 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 VIPP01282 170 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 ATP5DP30049 168 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 GP5P40197 560 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 SKIV2L2P42285 1042 aaKnown RBP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 ABCG1P45844 678 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 PMS2P54278 862 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 CSE1LP55060 971 aaKnown RBP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 CDKN2DP55273 166 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 SQSTM1Q13501 440 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 TMED2Q15363 201 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 GSPT2Q8IYD1 628 aaKnown RBP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 ZBTB2Q8N680 514 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 TFGQ92734 400 aaPredicted RBP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 INPP5DQ92835 1189 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 CXorf40BQ96DE9 158 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 C12orf66Q96MD2 445 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 CYTH2Q99418 400 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 CCDC3Q9BQI4 270 aa22.2■■□□□ 1.14
NDEL1-207ENST00000580012 RRAGDQ9NQL2 400 aaPredicted RBP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 V9GYY5 206 aaPredicted RBP22.2■■□□□ 1.14
NDEL1-207ENST00000580012 E5RI56 91 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 OPA1O60313 960 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 ACSL3O95573 720 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 ABHD2P08910 425 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 SYTL3Q4VX76 610 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 HECTD2Q5U5R9 776 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 TMEM26Q6ZUK4 368 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 SPRED1Q7Z699 444 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 PPM1NQ8N819 430 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 ACVR1CQ8NER5 493 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 CD200R1Q8TD46 325 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 ADAMTS14Q8WXS8 1223 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 FAM136AQ96C01 138 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 GPR21Q99679 349 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.19■■□□□ 1.14
NDEL1-207ENST00000580012 EPB41L4BQ9H329 900 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 TAS2R13Q9NYV9 303 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 HEBP2Q9Y5Z4 205 aa22.19■■□□□ 1.14
NDEL1-207ENST00000580012 CFAP20Q9Y6A4 193 aaKnown RBP22.19■■□□□ 1.14
NDEL1-207ENST00000580012 IFRD1O00458 451 aaPredicted RBP22.18■■□□□ 1.14
NDEL1-207ENST00000580012 NTN3O00634 580 aaPredicted RBP22.18■■□□□ 1.14
NDEL1-207ENST00000580012 RIPK2O43353 540 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 VPS26AO75436 327 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 FDXRP22570 491 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 NDUFS1P28331 727 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 ACSBG2Q5FVE4 666 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 N4BP2L1Q5TBK1 243 aaPredicted RBP22.18■■□□□ 1.14
NDEL1-207ENST00000580012 GRTP1Q5TC63 336 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 FAM45BPQ6NSW5 357 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 CYHR1Q6ZMK1 362 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 CTAGE3PQ8IX95 158 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 SIDT2Q8NBJ9 832 aaKnown RBP22.18■■□□□ 1.14
NDEL1-207ENST00000580012 FAM45AQ8TCE6 357 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 VPS39Q96JC1 886 aa22.18■■□□□ 1.14
NDEL1-207ENST00000580012 STN1Q9H668 368 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms