RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 ZNF248Q8NDW4 579 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 NAF1Q96HR8 494 aaKnown RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 TGM7Q96PF1 710 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 TRIM51Q9BSJ1 452 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 RPS6KL1Q9Y6S9 549 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 UBA6A0AVT1 1052 aaPredicted RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 CAPN5O15484 640 aaPredicted RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 TTI1O43156 1089 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 CCL4P13236 92 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 CD151P48509 253 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 ANKRD20A4Q4UJ75 823 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 PTRHD1Q6GMV3 140 aaKnown RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 IRGCQ6NXR0 463 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 KLHL35Q6PF15 583 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 ARHGAP22Q7Z5H3 698 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 HOOK3Q86VS8 718 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 FAM129CQ86XR2 697 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 FCRL3Q96P31 734 aaPredicted RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 FERD3LQ96RJ6 166 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 KRT12Q99456 494 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 KIR3DX1Q9H7L2 352 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 IL1RAPL1Q9NZN1 696 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 GNPTGQ9UJJ9 305 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 A0A087WV48 116 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 PFDN6O15212 129 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 C9P02748 559 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 IVDP26440 423 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 SLC5A2P31639 672 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 ARCN1P48444 511 aaKnown RBP20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 CSE1LP55060 971 aaKnown RBP20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 PLOD1Q02809 727 aaPredicted RBP20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 PDZD3Q86UT5 571 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 AGGF1Q8N302 714 aaeCLIP20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 LKAAEAR1Q8TD35 194 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 ZFPM2Q8WW38 1151 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 TFGQ92734 400 aaPredicted RBP20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 USP7Q93009 1102 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 STAMBPL1Q96FJ0 436 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 SIGLEC10Q96LC7 697 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 C9orf72Q96LT7 481 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 SLC24A2Q9UI40 661 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 PCDHGA7Q9Y5G6 932 aa20.2■□□□□ 0.82
HCFC1R1-208ENST00000575214 URB1O60287 2271 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 SLC5A10A0PJK1 596 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 EFCAB7A8K855 629 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 IQCF5A8MTL0 148 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 RASSF9O75901 435 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 USP1O94782 785 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 FGF3P11487 239 aaPredicted RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 LEPRP48357 1165 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 EIF3BP55884 814 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 THOC5Q13769 683 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 TYSND1Q2T9J0 566 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 DNAJC21Q5F1R6 531 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 RNF187Q5TA31 235 aaPredicted RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 NEPROQ6NW34 567 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 TMEM135Q86UB9 458 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 LRRC6Q86X45 466 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 KRT222Q8N1A0 295 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 HNRNPLLQ8WVV9 542 aaKnown RBP20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 KCNE4Q8WWG9 221 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 ZDHHC12Q96GR4 267 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 CARD6Q9BX69 1037 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 TRIM31Q9BZY9 425 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 OCIAD1Q9NX40 245 aa20.19■□□□□ 0.82
HCFC1R1-208ENST00000575214 ZFHX4Q86UP3 3567 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 PRAMEF10O60809 474 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 OGNP20774 298 aaKnown RBP20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 RPS3P23396 243 aaKnown RBP eCLIP20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 CCR7P32248 378 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 DHX9Q08211 1270 aaKnown RBP20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 HSPA14Q0VDF9 509 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 MORF4L2Q15014 288 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 TMEM164Q5U3C3 297 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 FAM92BQ6ZTR7 304 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 OOSP2Q86WS3 158 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 PHC3Q8NDX5 983 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 ACVR1CQ8NER5 493 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 ART4Q93070 314 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 C16orf45Q96MC5 204 aaPredicted RBP20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 PANX3Q96QZ0 392 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 TCF12Q99081 682 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 HGH1Q9BTY7 390 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 P2RY12Q9H244 342 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 MVB12BQ9H7P6 319 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 EPHA6Q9UF33 1036 aa20.18■□□□□ 0.82
HCFC1R1-208ENST00000575214 ZCWPW2A0A1B0GU75 182 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 OR5K3A6NET4 321 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 NVLO15381 856 aaKnown RBP20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 BANF1O75531 89 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 ANKRD34CP0C6C1 535 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 ABCG1P45844 678 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 PPP1CAP62136 330 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 TMED2Q15363 201 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 BBS9Q3SYG4 887 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 CACHD1Q5VU97 1274 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 ZNF470Q6ECI4 717 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 ARMC6Q6NXE6 501 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 C19orf48Q6RUI8 117 aa20.17■□□□□ 0.82
HCFC1R1-208ENST00000575214 CILP2Q8IUL8 1156 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms