RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 GABRB3P28472 473 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PDHA2P29803 388 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 GP5P40197 560 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PMS2P54278 862 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 VSNL1P62760 191 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 ILF2Q12905 390 aaKnown RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 KRT33BQ14525 404 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 CLCA4Q14CN2 919 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 RPE65Q16518 533 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 FAM153CQ494X1 144 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PERM1Q5SV97 790 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PLEKHS1Q5SXH7 462 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 RBM20Q5T481 1227 aaKnown RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 FAM45BPQ6NSW5 357 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 DUS1LQ6P1R4 473 aaKnown RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 ZNF549Q6P9A3 640 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 XKR5Q6UX68 686 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 TRMT10CQ7L0Y3 403 aaKnown RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PDZD3Q86UT5 571 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 SLC22A15Q8IZD6 547 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 FAM45AQ8TCE6 357 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 SH3KBP1Q96B97 665 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 INSM2Q96T92 566 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 CYTH2Q99418 400 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 SLC38A3Q99624 504 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 GPR21Q99679 349 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 TAS2R13Q9NYV9 303 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 ZNF624Q9P2J8 865 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 PCNX2A6NKB5 2137 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 CFAP54Q96N23 3096 aa12.77□□□□□ -0.37
CNOT1-217ENST00000569263 A0A087WUV0 522 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 PPM1DO15297 605 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 CDK4P11802 303 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 PNLIPP16233 465 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 SAT1P21673 171 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 SLC19A1P41440 591 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 UBE2IP63279 158 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 PDAP1Q13442 181 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 EFTUD2Q15029 972 aaKnown RBP eCLIP12.76□□□□□ -0.371e-11■□□□□ 10
CNOT1-217ENST00000569263 PLCL1Q15111 1095 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 UAP1Q16222 522 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 KLHL38Q2WGJ6 581 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 HECTD2Q5U5R9 776 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 CAPRIN2Q6IMN6 1127 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 DGLUCYQ7Z3D6 616 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 ZC3HC1Q86WB0 502 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 ZNF761Q86XN6 746 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 RBM12BQ8IXT5 1001 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 Q8N9G6 341 aaPredicted RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 SIDT2Q8NBJ9 832 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 MRRFQ96E11 262 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 VPS39Q96JC1 886 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 ELMO2Q96JJ3 720 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 RBBP8Q99708 897 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 ABCG4Q9H172 646 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 RHOJQ9H4E5 214 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 TOR4AQ9NXH8 423 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 KCNK4Q9NYG8 393 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 RABGEF1Q9UJ41 708 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 TSR3Q9UJK0 312 aaKnown RBP12.76□□□□□ -0.37
CNOT1-217ENST00000569263 COLEC10Q9Y6Z7 277 aa12.76□□□□□ -0.37
CNOT1-217ENST00000569263 DNAH14Q0VDD8 3507 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 RIPK2O43353 540 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 GPC4O75487 556 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 SLCO2B1O94956 709 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 C1QAP02745 245 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 RPN2P04844 631 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 NDUFS1P28331 727 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 ALDH4A1P30038 563 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 ATP5DP30049 168 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 SPRP35270 261 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-217ENST00000569263 MAPK9P45984 424 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 GPR3P46089 330 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 CLCN7P51798 805 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 SLC12A2P55011 1212 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 E2F1Q01094 437 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
CNOT1-217ENST00000569263 GRTP1Q5TC63 336 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 WDR93Q6P2C0 686 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-217ENST00000569263 ZNF438Q7Z4V0 828 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 SPRED1Q7Z699 444 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 SLCO6A1Q86UG4 719 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 VRK3Q8IV63 474 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 CFAP61Q8NHU2 1237 aa12.75□□□□□ -0.37
CNOT1-217ENST00000569263 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
CNOT1-217ENST00000569263 UBLCP1Q8WVY7 318 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-217ENST00000569263 TFGQ92734 400 aaPredicted RBP12.75□□□□□ -0.37
CNOT1-217ENST00000569263 INPP5DQ92835 1189 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms