RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 FBXO38Q6PIJ6 1188 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 TAS2R42Q7RTR8 314 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 SLC13A5Q86YT5 568 aaPredicted RBP9.77□□□□□ -0.85
CMTM3-209ENST00000565003 CLDN19Q8N6F1 224 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 GLIS1Q8NBF1 620 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 SIDT2Q8NBJ9 832 aaKnown RBP9.77□□□□□ -0.85
CMTM3-209ENST00000565003 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 STYXQ8WUJ0 223 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 HEXDCQ8WVB3 486 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 C1orf54Q8WWF1 131 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 STAMBPL1Q96FJ0 436 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 CATSPER2Q96P56 530 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 CD180Q99467 661 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 CCM2Q9BSQ5 444 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 SLC25A18Q9H1K4 315 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 FGF21Q9NSA1 209 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 RARRES3Q9UL19 164 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 PRSS21Q9Y6M0 314 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 COLEC10Q9Y6Z7 277 aa9.77□□□□□ -0.85
CMTM3-209ENST00000565003 PIKFYVEQ9Y2I7 2098 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 UBA6A0AVT1 1052 aaPredicted RBP9.76□□□□□ -0.85
CMTM3-209ENST00000565003 CCDC162PA2VCL2 907 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 PSMD3O43242 534 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 KRT86O43790 486 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 SUN1O94901 812 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 IFNB1P01574 187 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 SFTPCP11686 197 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 ETS1P14921 441 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 POLR2CP19387 275 aaPredicted RBP9.76□□□□□ -0.85
CMTM3-209ENST00000565003 TCN2P20062 427 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 NDUFS1P28331 727 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 STIP1P31948 543 aaKnown RBP9.76□□□□□ -0.85
CMTM3-209ENST00000565003 FOXN2P32314 431 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 GRIA1P42261 906 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 CCR10P46092 362 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 PREPP48147 710 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 HSD11B2P80365 405 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 ACY1Q03154 408 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 KCNAB2Q13303 367 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 SNX1Q13596 522 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 KRT33BQ14525 404 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 GPR19Q15760 415 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 DEFB109BQ30KR1 87 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 CYB5D1Q6P9G0 228 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 LINC00523Q86TU6 105 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 KMT5CQ86Y97 462 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 D2HGDHQ8N465 521 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 PHC3Q8NDX5 983 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 ACVR1CQ8NER5 493 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 OR13J1Q8NGT2 312 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 LCN9Q8WX39 176 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF501Q96CX3 271 aaPredicted RBP9.76□□□□□ -0.85
CMTM3-209ENST00000565003 TSGA10Q9BZW7 698 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 TRIM4Q9C037 500 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 FAM117AQ9C073 453 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 ADNPQ9H2P0 1102 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 VPS37BQ9H9H4 285 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 ETNK1Q9HBU6 452 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 PDE7BQ9NP56 450 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 LHX9Q9NQ69 397 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 SMARCAL1Q9NZC9 954 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 SLC2A6Q9UGQ3 507 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 HEMK1Q9Y5R4 338 aaPredicted RBP9.76□□□□□ -0.85
CMTM3-209ENST00000565003 HEBP2Q9Y5Z4 205 aa9.76□□□□□ -0.85
CMTM3-209ENST00000565003 BOD1L1Q8NFC6 3051 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 GSAPA4D1B5 854 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 ERI2A8K979 691 aaKnown RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 GOLGA6L6A8MZA4 724 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 IFRD1O00458 451 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 BTN3A3O00478 584 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 BTN3A1O00481 513 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 SUV39H1O43463 412 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 ZBTB11O95625 1053 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 NTRK1P04629 796 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 FURINP09958 794 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 MSNP26038 577 aaKnown RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 FDFT1P37268 417 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 NSG1P42857 185 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 ARL4DP49703 201 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 GSDMDP57764 484 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 TUBB4BP68371 445 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 MC1RQ01726 317 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 CDH17Q12864 832 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 SEMA5AQ13591 1074 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 DNASE1L3Q13609 305 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 TUBB2AQ13885 445 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 SIX1Q15475 284 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 CRTC2Q53ET0 693 aaPredicted RBP9.75□□□□□ -0.85
CMTM3-209ENST00000565003 MEI1Q5TIA1 1274 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 ARMC6Q6NXE6 501 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 NAPRTQ6XQN6 538 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 TMEM135Q86UB9 458 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 DNAAF3Q8N9W5 541 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 OR52E1Q8NGJ3 308 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 CT55Q8WUE5 264 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 ZNF778Q96MU6 729 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 FERD3LQ96RJ6 166 aa9.75□□□□□ -0.85
CMTM3-209ENST00000565003 RUFY1Q96T51 708 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms