RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 EBAG9O00559 213 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 NDUFAB1O14561 156 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 LRP3O75074 770 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 SPAG7O75391 227 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 SLCO2B1O94956 709 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 KLHL2O95198 593 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 RASGRP1O95267 797 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 TSPAN12O95859 305 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 FAM107AO95990 144 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 TNFP01375 233 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 LTA4HP09960 611 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 CCDC166P0CW27 439 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 VCLP18206 1134 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 KCNA4P22459 653 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 GNPDA1P46926 289 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 SLC18A1P54219 525 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 NXPH1P58417 271 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 ATP6V0D1P61421 351 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 PPARDQ03181 441 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 SPEM2Q0P670 501 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 HSPA14Q0VDF9 509 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 EIF2B5Q13144 721 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 BOP1Q14137 746 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 CSHL1Q14406 222 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 TEAD4Q15561 434 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 SYTL3Q4VX76 610 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 ACSBG2Q5FVE4 666 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 AGAP9Q5VTM2 703 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 PEAR1Q5VY43 1037 aaPredicted RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 PARGQ86W56 976 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 PLD6Q8N2A8 252 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 KCTD4Q8WVF5 259 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 GLMNQ92990 594 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 TSACCQ96A04 125 aaPredicted RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 LINGO1Q96FE5 620 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 DERL2Q9GZP9 239 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 COG4Q9H9E3 785 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 NMRAL1Q9HBL8 299 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 TRNAU1APQ9NX07 287 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 SLC23A2Q9UGH3 650 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 PILRBQ9UKJ0 227 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 RUVBL2Q9Y230 463 aaKnown RBP12.66□□□□□ -0.38
SPG7-209ENST00000564047 CDYLQ9Y232 598 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 GPSM3Q9Y4H4 160 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 EML5Q05BV3 1969 aa12.66□□□□□ -0.38
SPG7-209ENST00000564047 LAMA1P25391 3075 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.65□□□□□ -0.38
SPG7-209ENST00000564047 CCDC189A1A4V9 331 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 MPC1LP0DKB6 136 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 CD1DP15813 335 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 PBLDP30039 288 aaPredicted RBP12.65□□□□□ -0.38
SPG7-209ENST00000564047 HOXD12P35452 270 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 GMPRP36959 345 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 BLKP51451 505 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 CLCNKAP51800 687 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 HK3P52790 923 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 DLG1Q12959 904 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 RPA4Q13156 261 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 LRP8Q14114 963 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 ACAP2Q15057 778 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 PLA2G4EQ3MJ16 856 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 METRNLQ641Q3 311 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 KLC3Q6P597 504 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 FOXR1Q6PIV2 292 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 NAPRTQ6XQN6 538 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 CDHR3Q6ZTQ4 885 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 NEK10Q6ZWH5 1172 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 CHST15Q7LFX5 561 aaPredicted RBP12.65□□□□□ -0.38
SPG7-209ENST00000564047 RD3Q7Z3Z2 195 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 SYT12Q8IV01 421 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 CFAP206Q8IYR0 622 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 MYO1HQ8N1T3 1032 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 EEF1AKMT1Q8WVE0 214 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 TMEM159Q96B96 161 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 NXNL1Q96CM4 212 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 GPR78Q96P69 363 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 IQCGQ9H095 443 aaKnown RBP12.65□□□□□ -0.38
SPG7-209ENST00000564047 DPEP2Q9H4A9 486 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 CCDC134Q9H6E4 229 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 TM7SF3Q9NS93 570 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 PNMA8BQ9ULN7 279 aaPredicted RBP12.65□□□□□ -0.38
SPG7-209ENST00000564047 PLLPQ9Y342 182 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 BPTFQ12830 3046 aa12.65□□□□□ -0.38
SPG7-209ENST00000564047 TMEM120BA0PK00 339 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 GMNCA6NCL1 334 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 PRR19A6NJB7 356 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 TM9SF1O15321 606 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 ZWINTO95229 277 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 TOP3BO95985 862 aaKnown RBP12.64□□□□□ -0.39
SPG7-209ENST00000564047 ACP5P13686 325 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 MAPK9P45984 424 aa12.64□□□□□ -0.39
SPG7-209ENST00000564047 CSNK1EP49674 416 aaKnown RBP12.64□□□□□ -0.39
SPG7-209ENST00000564047 C21orf59P57076 290 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms