RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 EFCAB7A8K855 629 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 CCDC188H7C350 402 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 AGRPO00253 132 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 PRMT5O14744 637 aaPredicted RBP13.07□□□□□ -0.32
CLK3-213ENST00000563842 KLK10O43240 276 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 NDUFS3O75489 264 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 FGF3P11487 239 aaPredicted RBP13.07□□□□□ -0.32
CLK3-213ENST00000563842 CCL4P13236 92 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 NMBRP28336 390 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 ETV5P41161 510 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 COL28A1Q2UY09 1125 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 SYTL3Q4VX76 610 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 DCAF12Q5T6F0 453 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 RNF187Q5TA31 235 aaPredicted RBP13.07□□□□□ -0.32
CLK3-213ENST00000563842 ARMC6Q6NXE6 501 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
CLK3-213ENST00000563842 OOSP2Q86WS3 158 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 LRRC6Q86X45 466 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 ACVR1CQ8NER5 493 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 CAPZA3Q96KX2 299 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 RMDN2Q96LZ7 410 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 TGM7Q96PF1 710 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 PANX3Q96QZ0 392 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 TCF12Q99081 682 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 CD180Q99467 661 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 ZPBPQ9BS86 351 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 DDA1Q9BW61 102 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 CARD6Q9BX69 1037 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 OR52A5Q9H2C5 316 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 MVB12BQ9H7P6 319 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 ASIC3Q9UHC3 531 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 SLC24A2Q9UI40 661 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 GCN1Q92616 2671 aaKnown RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 PRAMEF33A0A0G2JMD5 474 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 FAM237BA0A1B0GVD1 139 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 MATN2O00339 956 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 KPNA5O15131 536 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 KDM1AO60341 852 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PRAMEF10O60809 474 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 RASSF9O75901 435 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 VAPBO95292 243 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 LIPCP11150 499 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 ITPKBP27987 946 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 GFERP55789 205 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 TMPRSS3P57727 454 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 MC2RQ01718 297 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 TLE3Q04726 772 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PRKAA1Q13131 559 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PTK6Q13882 451 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 ZNF658BQ4V348 819 aaPredicted RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 ANKRD22Q5VYY1 191 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PTRHD1Q6GMV3 140 aaKnown RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 IRGCQ6NXR0 463 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 CEACAM20Q6UY09 585 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PRSS42Q7Z5A4 293 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PDZD3Q86UT5 571 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 CAND1Q86VP6 1230 aaKnown RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 CREG2Q8IUH2 290 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 CARFQ8N187 725 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 LILRA3Q8N6C8 439 aaPredicted RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 ASZ1Q8WWH4 475 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 UBXN4Q92575 508 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 RSC1A1Q92681 617 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 TFGQ92734 400 aaPredicted RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 ART4Q93070 314 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 MFSD3Q96ES6 412 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 DDX47Q9H0S4 455 aaKnown RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 ZNF768Q9H5H4 540 aaKnown RBP13.06□□□□□ -0.32
CLK3-213ENST00000563842 FBXO8Q9NRD0 319 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 GNPTGQ9UJJ9 305 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 VPS9D1Q9Y2B5 631 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 PRSS21Q9Y6M0 314 aa13.06□□□□□ -0.32
CLK3-213ENST00000563842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
CLK3-213ENST00000563842 SLC5A10A0PJK1 596 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 C9orf172C9J069 976 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.05□□□□□ -0.32
CLK3-213ENST00000563842 H3BMM5 538 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 STMND1H3BQB6 276 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 SMAPO00193 183 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 DNALI1O14645 258 aaPredicted RBP13.05□□□□□ -0.32
CLK3-213ENST00000563842 OR1I1O60431 355 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 AVILO75366 819 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 TMEM63AO94886 807 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 APOA4P06727 396 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 PDHA2P29803 388 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 BOP1Q14137 746 aaKnown RBP13.05□□□□□ -0.32
CLK3-213ENST00000563842 DHX34Q14147 1143 aaKnown RBP13.05□□□□□ -0.32
CLK3-213ENST00000563842 TMED2Q15363 201 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 CACHD1Q5VU97 1274 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 DUS1LQ6P1R4 473 aaKnown RBP13.05□□□□□ -0.32
CLK3-213ENST00000563842 XKR5Q6UX68 686 aa13.05□□□□□ -0.32
CLK3-213ENST00000563842 HOOK3Q86VS8 718 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms