RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CYP39A1Q9NYL5 469 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CISD1Q9NZ45 108 aaKnown RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CTNNAL1Q9UBT7 734 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CCPG1Q9ULG6 757 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ISY1Q9ULR0 285 aaKnown RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 NFE2L3Q9Y4A8 694 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 SCN5AQ14524 2016 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ASTN1O14525 1302 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ABCB11O95342 1321 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PTPRSQ13332 1948 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 RANBP2P49792 3224 aaKnown RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 J3KR12 359 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 ZBTB5O15062 677 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 SLC16A5O15375 505 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 P4HA2O15460 535 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 HSPA12AO43301 675 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 TSPAN9O75954 239 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 SNAI1O95863 264 aaPredicted RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 MT-CYBP00156 380 aaPredicted RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 F9P00740 461 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 CLEC3BP05452 202 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 IGHV4-30-4P0DP06 118 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 CALM1P0DP23 149 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 CALM2P0DP24 149 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 CALM3P0DP25 149 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 LAMP2P13473 410 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 ETFAP13804 333 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 CCND3P30281 292 aaPredicted RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 GGT5P36269 586 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 PIGAP37287 484 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 GABRB2P47870 512 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 EVCP57679 992 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 SNAP25P60880 206 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 ROR1Q01973 937 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 POU3F1Q03052 451 aaPredicted RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 MAMLD1Q13495 774 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 ACVR2BQ13705 512 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 PPP2R5BQ15173 497 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 QRICH1Q2TAL8 776 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 RILPL1Q5EBL4 403 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 PPP6R3Q5H9R7 873 aaPredicted RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 SNX30Q5VWJ9 437 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 MFSD14CQ5VZR4 134 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 SLC30A6Q6NXT4 461 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 CPLX4Q7Z7G2 160 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 ZC3HC1Q86WB0 502 aaKnown RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 DIS3L2Q8IYB7 885 aaKnown RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 ADSSL1Q8N142 457 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 NFKBIDQ8NI38 313 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 U2AF1L4Q8WU68 220 aaKnown RBP4.87□□□□□ -1.63
LINC00254-201ENST00000563416 IGSF21Q96ID5 467 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 DEFB118Q96PH6 123 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 SPZ1Q9BXG8 430 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 C1QTNF4Q9BXJ3 329 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 LRRC2Q9BYS8 371 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 BPIFA1Q9NP55 256 aa4.87□□□□□ -1.63
LINC00254-201ENST00000563416 LAMA2P24043 3122 aaKnown RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 MICAL3Q7RTP6 2002 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 CCDC69A6NI79 296 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 AP3D1O14617 1153 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 BCAT2O15382 392 aaPredicted RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 ZBTB43O43298 467 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 KLK8O60259 260 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 PPP1R3DO95685 299 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 MLYCDO95822 493 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 DNTTP04053 509 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 MMP2P08253 660 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 KIF5BP33176 963 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 COMPP49747 757 aaPredicted RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 GNAQP50148 359 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 HSD17B4P51659 736 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 CNTN2Q02246 1040 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 COASYQ13057 564 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 SNTA1Q13424 505 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 DHX34Q14147 1143 aaKnown RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 LRRC8EQ6NSJ5 796 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 INO80CQ6PI98 192 aaPredicted RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 BLOC1S2Q6QNY1 142 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 RUFY3Q7L099 469 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 BEST2Q8NFU1 509 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 CTCFLQ8NI51 663 aaPredicted RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 ERGIC1Q969X5 290 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 KLHL29Q96CT2 875 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 TCEANC2Q96MN5 208 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 JAKMIP1Q96N16 626 aaKnown RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 BAG1Q99933 345 aaPredicted RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 LZTS2Q9BRK4 669 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 MAGEE1Q9HCI5 957 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 EIF2B3Q9NR50 452 aaKnown RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 TAS2R10Q9NYW0 307 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 KCND2Q9NZV8 630 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 HSPB7Q9UBY9 170 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 SLCO3A1Q9UIG8 710 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 CDC14AQ9UNH5 594 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 SNX8Q9Y5X2 465 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 FRMPD4Q14CM0 1322 aa4.86□□□□□ -1.63
LINC00254-201ENST00000563416 ATXN2Q99700 1313 aaKnown RBP4.86□□□□□ -1.63
LINC00254-201ENST00000563416 KLF18A0A0U1RQI7 1052 aa4.85□□□□□ -1.63
LINC00254-201ENST00000563416 CPED1A4D0V7 1026 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms