RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 GNPTGQ9UJJ9 305 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 ACACAQ13085 2346 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 LAMA5O15230 3695 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 ZCWPW2A0A1B0GU75 182 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 HGSO14964 777 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 USP1O94782 785 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 CCR7P32248 378 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 ITGA8P53708 1063 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 MAPK10P53779 464 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 TRA2AQ13595 282 aaKnown RBP eCLIP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 THOC5Q13769 683 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 BBS9Q3SYG4 887 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 MSS51Q4VC12 460 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 DNAJC21Q5F1R6 531 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 NEPROQ6NW34 567 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 PLXDC1Q8IUK5 500 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 ZNF592Q92610 1267 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 TMEM159Q96B96 161 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 ZNF578Q96N58 590 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 PWWP2AQ96N64 755 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 FERD3LQ96RJ6 166 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 HEBP2Q9Y5Z4 205 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 COLEC10Q9Y6Z7 277 aa19.44■□□□□ 0.7
TSPAN3-210ENST00000561277 CAPN5O15484 640 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 SEC31AO94979 1220 aaKnown RBP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 ITGA2BP08514 1039 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 F7P08709 466 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 CCL4P13236 92 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 CSTF2P33240 577 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 ETV5P41161 510 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 CAPZBP47756 277 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 TYSND1Q2T9J0 566 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 ZNF470Q6ECI4 717 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 HIBCHQ6NVY1 386 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 PDZD3Q86UT5 571 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 PHC3Q8NDX5 983 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 FGF11Q92914 225 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 P2RY12Q9H244 342 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 KIR3DX1Q9H7L2 352 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 C20orf96Q9NUD7 363 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 SLC24A2Q9UI40 661 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 SNX24Q9Y343 169 aa19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 MN1Q10571 1320 aaPredicted RBP19.43■□□□□ 0.7
TSPAN3-210ENST00000561277 SLC5A10A0PJK1 596 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 PFDN6O15212 129 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 URI1O94763 535 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 PGAM1P18669 254 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 OGNP20774 298 aaKnown RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 LEPRP48357 1165 aaKnown RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 ERVPABLB-1P60509 514 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 HSPA14Q0VDF9 509 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 LONRF1Q17RB8 773 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 HP1BP3Q5SSJ5 553 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 RNF187Q5TA31 235 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 IRGCQ6NXR0 463 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 IGF2-ASQ6U949 168 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 FAM129CQ86XR2 697 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 CILP2Q8IUL8 1156 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 AGBL5Q8NDL9 886 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 LPGAT1Q92604 370 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 TFGQ92734 400 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 PDP2Q9P2J9 529 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 CRYL1Q9Y2S2 319 aa19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 ANKRD11Q6UB99 2663 aaPredicted RBP19.42■□□□□ 0.7
TSPAN3-210ENST00000561277 RAD51CO43502 376 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 RASSF9O75901 435 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 NDUFS1P28331 727 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 FMO4P31512 558 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 RPL21P46778 160 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 CD151P48509 253 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 CRYMQ14894 314 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 MAATS1Q7Z4T9 603 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 LRRC6Q86X45 466 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 DENND6AQ8IWF6 608 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 PDIK1LQ8N165 341 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 SNIP1Q8TAD8 396 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 NAF1Q96HR8 494 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 PANX3Q96QZ0 392 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 TCF12Q99081 682 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 EBNA1BP2Q99848 306 aaKnown RBP19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 HGH1Q9BTY7 390 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 CARD6Q9BX69 1037 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 CFAP47Q6ZTR5 3102 aa19.41■□□□□ 0.7
TSPAN3-210ENST00000561277 FAM187AA6NFU0 413 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CDRT15L2A8MXV6 281 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 APOA4P06727 396 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 RPS3P23396 243 aaKnown RBP eCLIP19.4■□□□□ 0.73e-7■■■□□ 18.1
TSPAN3-210ENST00000561277 PCBP4P57723 403 aaKnown RBP19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 PPP1CAP62136 330 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 PRKG2Q13237 762 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CTBP1Q13363 440 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 HIF1AQ16665 826 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CTSL3PQ5NE16 218 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 KLHL35Q6PF15 583 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 FAM92BQ6ZTR7 304 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 CENPUQ71F23 418 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ARHGAP22Q7Z5H3 698 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 UNC5BQ8IZJ1 945 aa19.4■□□□□ 0.7
TSPAN3-210ENST00000561277 ACVR1CQ8NER5 493 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms