RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 NEK10Q6ZWH5 1172 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 AHSA2Q719I0 299 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 LRRC8DQ7L1W4 858 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 CYP4Z1Q86W10 505 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 NLGN4XQ8N0W4 816 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 DPP10Q8N608 796 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 BLOC1S5Q8TDH9 187 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 RHBDF1Q96CC6 855 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 OSMRQ99650 979 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 DUSP21Q9H596 190 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 CNGB3Q9NQW8 809 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 TSR3Q9UJK0 312 aaKnown RBP16.24■□□□□ 0.19
TPM1-228ENST00000560975 ZNF112Q9UJU3 913 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 ZNF221Q9UK13 617 aa16.24■□□□□ 0.19
TPM1-228ENST00000560975 KDM4FA0A1W2PPD8 638 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PABPN1LA6NDY0 278 aaKnown RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 CXCR6O00574 342 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 SLC16A6O15403 523 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 CD3EAPO15446 510 aaKnown RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 RHOBTB1O94844 696 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 GLP2RO95838 553 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PWP1Q13610 501 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 GTF2H3Q13889 308 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 TPRG1LQ5T0D9 272 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 Q6ZSR9 355 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 MICALL2Q8IY33 904 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 STAG3L4Q8TBR4 150 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PGAP3Q96FM1 320 aaPredicted RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 ADPRHL2Q9NX46 363 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 NEU3Q9UQ49 428 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PKP3Q9Y446 797 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 ARL5AQ9Y689 179 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 FNDC1Q4ZHG4 1894 aaPredicted RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 PLXNA1Q9UIW2 1896 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 ARVCFO00192 962 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 DNTTP04053 509 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 TGFBR2P37173 567 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 GBX1Q14549 363 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 ALKAL1Q6UXT8 129 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PRSS48Q7RTY5 328 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PARP16Q8N5Y8 322 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 ZNF548Q8NEK5 533 aaPredicted RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 OR7G1Q8NGA0 311 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 OR52B6Q8NGF0 335 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 SLC10A4Q96EP9 437 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PCED1BQ96HM7 432 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 ACTL8Q9H568 366 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 TFB2MQ9H5Q4 396 aaKnown RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 RNF167Q9H6Y7 350 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 EIF2B4Q9UI10 523 aaKnown RBP16.23■□□□□ 0.19
TPM1-228ENST00000560975 GMPPBQ9Y5P6 360 aa16.23■□□□□ 0.19
TPM1-228ENST00000560975 PDZK1P1A8MUH7 402 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 MYO1GB0I1T2 1018 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 KERAO60938 352 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 PAGE1O75459 146 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 GJB3O75712 270 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
TPM1-228ENST00000560975 WARSP23381 471 aaKnown RBP16.22■□□□□ 0.19
TPM1-228ENST00000560975 EPHA2P29317 976 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 FMO4P31512 558 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 CLK3P49761 638 aaKnown RBP16.22■□□□□ 0.19
TPM1-228ENST00000560975 ZNF33AQ06730 810 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 SOWAHCQ53LP3 525 aaPredicted RBP16.22■□□□□ 0.19
TPM1-228ENST00000560975 ATAD3CQ5T2N8 411 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 CYP20A1Q6UW02 462 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 GCNT7Q6ZNI0 430 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 FKBP9P1Q75LS8 142 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 OR13C4Q8NGS5 318 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 ZNF566Q969W8 418 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 GORASP2Q9H8Y8 452 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 QPCTLQ9NXS2 382 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 NEUROG3Q9Y4Z2 214 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
TPM1-228ENST00000560975 LOC100506127A0A0U1RQW1 187 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 ELOVL7A1L3X0 281 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 FAM172BPA6NC97 362 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 METTL15A6NJ78 407 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 SAGE2PA6NJ88 616 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 BTN3A1O00481 513 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 AIREO43918 545 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 PTTG1O95997 202 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 LIPAP38571 399 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 CYP4F3Q08477 520 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 TTLL4Q14679 1199 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 KCTD2Q14681 263 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 PON2Q15165 354 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 NR6A1Q15406 480 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 GTDC1Q4AE62 458 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 CCDC58Q4VC31 144 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 SIRPB2Q5JXA9 342 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 IL27RAQ6UWB1 636 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 FLAD1Q8NFF5 587 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 RHEBL1Q8TAI7 183 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 SLC25A51Q9H1U9 297 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 MMP27Q9H306 513 aa16.22■□□□□ 0.19
TPM1-228ENST00000560975 EIF3LQ9Y262 564 aaKnown RBP16.22■□□□□ 0.19
TPM1-228ENST00000560975 AP3D1O14617 1153 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 SERPINA1P01009 418 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 NPPAP01160 153 aa16.21■□□□□ 0.19
TPM1-228ENST00000560975 RPS17P08708 135 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms