RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PCDHB1Q9Y5F3 818 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 TNPO3Q9Y5L0 923 aaKnown RBP9.87□□□□□ -0.83
LRRC28-216ENST00000559819 CPQQ9Y646 472 aa9.87□□□□□ -0.83
LRRC28-216ENST00000559819 A0A087WXM4 84 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 H0Y858 1186 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 HOXA2O43364 376 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ABLIM3O94929 683 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 GLUD1P00367 558 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 OTCP00480 354 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CDK4P11802 303 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CAPGP40121 348 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 SH3BGRP55822 239 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 TUBA4AP68366 448 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 NFATC2Q13469 925 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 PWP1Q13610 501 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 GTDC1Q4AE62 458 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 KCTD21Q4G0X4 260 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 FAM117BQ6P1L5 589 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ENPP6Q6UWR7 440 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ARHGAP22Q7Z5H3 698 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 PROSER1Q86XN7 944 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 RIMKLAQ8IXN7 391 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 RBFAQ8N0V3 343 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 DHRSXQ8N5I4 330 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 HJURPQ8NCD3 748 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 BPIFB1Q8TDL5 484 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 FIG4Q92562 907 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 FAM126AQ9BYI3 521 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 NTN4Q9HB63 628 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 HMX1Q9NP08 348 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 THEGQ9P2T0 379 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ATXN10Q9UBB4 475 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ZNHIT2Q9UHR6 403 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CRLS1Q9UJA2 301 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 GNPTGQ9UJJ9 305 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 OARD1Q9Y530 152 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 PCDHB3Q9Y5E6 796 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 PRRG1O14668 218 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 BNIP3LO60238 219 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 TRBC1P01850 177 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 UMPSP11172 480 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CDH1P12830 882 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 TCF3P15923 654 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 RPS6KA3P51812 740 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 IST1P53990 364 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CYP4F8P98187 520 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 BCL2L1Q07817 233 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 NKG7Q16617 165 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 FAM174BQ3ZCQ3 159 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 AASDHQ4L235 1098 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 SPOUT1Q5T280 376 aaKnown RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ANKRD34AQ69YU3 496 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 RFLNAQ6ZTI6 216 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 GPR141Q7Z602 305 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 SNX20Q7Z614 316 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 LIX1Q8N485 282 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 ZBTB2Q8N680 514 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 TNIP2Q8NFZ5 429 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 FBXO30Q8TB52 745 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 OSCP1Q8WVF1 389 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 TBCDQ9BTW9 1192 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 NPLQ9BXD5 320 aaPredicted RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 DNMT3BQ9UBC3 853 aaKnown RBP9.86□□□□□ -0.83
LRRC28-216ENST00000559819 OPTCQ9UBM4 332 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 STOML2Q9UJZ1 356 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CDC14AQ9UNH5 594 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 CROCCQ5TZA2 2017 aa9.86□□□□□ -0.83
LRRC28-216ENST00000559819 hCG_2014768A0A024R1R8 64 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 GLYATL1P3A0A0U1RQE8 302 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 LOC730098B7Z3J9 87 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 UPK1AO00322 258 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 NRG2O14511 850 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 B4GAT1O43505 415 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ANXA6P08133 673 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ITGALP20701 1170 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 RPS3P23396 243 aaKnown RBP eCLIP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ACRV1P26436 265 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 RGS4P49798 205 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 AP1S1P61966 158 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 PPP1R8Q12972 351 aaKnown RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 LAPTM5Q13571 262 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 FXNQ16595 210 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 CDKN3Q16667 212 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 SPANXN4Q5MJ08 99 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 SUSD1Q6UWL2 747 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 CERS6Q6ZMG9 384 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 TPGS1Q6ZTW0 290 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 MSRB3Q8IXL7 192 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 RNF168Q8IYW5 571 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-216ENST00000559819 PHACTR4Q8IZ21 702 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 DCAF4L2Q8NA75 395 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 OR10A6Q8NH74 314 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ITFG1Q8TB96 612 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 SLC13A3Q8WWT9 602 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 TMBIM1Q969X1 311 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 RHBDF1Q96CC6 855 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 ZNF583Q96ND8 569 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 CD244Q9BZW8 370 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 LTB4R2Q9NPC1 389 aa9.85□□□□□ -0.83
LRRC28-216ENST00000559819 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms