RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 ZC3H18Q86VM9 953 aaKnown RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 TMEM126BQ8IUX1 230 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 RHOT2Q8IXI1 618 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OR4K2Q8NGD2 314 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 OR8K5Q8NH50 307 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 NLNQ9BYT8 704 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 PITPNM3Q9BZ71 974 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ZCCHC2Q9C0B9 1178 aaKnown RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ABHD10Q9NUJ1 306 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 DDX56Q9NY93 547 aaKnown RBP13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 LUZP4Q9P127 313 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 ACSL5Q9ULC5 683 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 VPS4AQ9UN37 437 aa13.96□□□□□ -0.17
CHMP4BP1-201ENST00000556017 BTN3A3O00478 584 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 AGFG2O95081 481 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SLC1A1P43005 524 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 INPP5JQ15735 1006 aaPredicted RBP13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FHL5Q5TD97 284 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KAZNQ674X7 775 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SLC6A19Q695T7 634 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PID1Q7Z2X4 250 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 OOSP2Q86WS3 158 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 OR4E2Q8NGC2 313 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SSC4DQ8WTU2 575 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 HAUS1Q96CS2 278 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 OR52A5Q9H2C5 316 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ACSS2Q9NR19 701 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KLHL8Q9P2G9 620 aaPredicted RBP13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FAM8A1Q9UBU6 413 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FKBPLQ9UIM3 349 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CREBBPQ92793 2442 aa13.95□□□□□ -0.18
CHMP4BP1-201ENST00000556017 IGLV3-16A0A075B6K0 115 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 WIPF3A6NGB9 483 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 AKR1B10O60218 316 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KLF7O75840 302 aaPredicted RBP13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SRP72O76094 671 aaKnown RBP13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TMEM63AO94886 807 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 POLBP06746 335 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CTSBP07858 339 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 MSH3P20585 1137 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PRDX3P30048 256 aaKnown RBP13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GABRA4P48169 554 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PRLHRP49683 370 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GSDMDP57764 484 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TFDP2Q14188 446 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 EIF2S3LQ2VIR3 472 aaKnown RBP13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PTCHD3Q3KNS1 767 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 DENND5AQ6IQ26 1287 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GLIS1Q8NBF1 620 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 OR13C4Q8NGS5 318 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 C19orf60Q96EN9 201 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TCTN2Q96GX1 697 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 VAT1Q99536 393 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SMAD5Q99717 465 aaKnown RBP13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ASB8Q9H765 288 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 C1GALT1Q9NS00 363 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PKP3Q9Y446 797 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PCDHGB7Q9Y5F8 929 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ALG6Q9Y672 507 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ABCA12Q86UK0 2595 aa13.94□□□□□ -0.18
CHMP4BP1-201ENST00000556017 BTN3A1O00481 513 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 STX7O15400 261 aaKnown RBP13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PSTPIP1O43586 416 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 MFAP3LO75121 409 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CNOT3O75175 753 aaKnown RBP13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PVRP15151 417 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 RBL1P28749 1068 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 PDHA2P29803 388 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 AKT1P31749 480 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ARL4DP49703 201 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CDKN1CP49918 316 aaPredicted RBP13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 VAV2P52735 878 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZNF140P52738 457 aaPredicted RBP13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TPM4P67936 248 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ATP1A4Q13733 1029 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TAF1AQ15573 450 aaPredicted RBP13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ZIC1Q15915 447 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TFDP3Q5H9I0 405 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CRB2Q5IJ48 1285 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CDHR3Q6ZTQ4 885 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KLHDC8BQ8IXV7 354 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 SYTL1Q8IYJ3 562 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CFAP206Q8IYR0 622 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KATNAL2Q8IYT4 538 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 ADGRF3Q8IZF5 1079 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 EFCAB3Q8N7B9 438 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FLVCR1-AS1Q8TAF5 88 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 CPT1BQ92523 772 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 KRT35Q92764 455 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 P3H4Q92791 437 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 TRAPPC9Q96Q05 1148 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 FICDQ9BVA6 458 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 MFRPQ9BY79 579 aa13.93□□□□□ -0.18
CHMP4BP1-201ENST00000556017 GBA3Q9H227 469 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms