RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CACNG1Q06432 222 aa15.04■□□□□ -0
SNX6-205ENST00000555648 DNASE1L3Q13609 305 aa15.04■□□□□ -0
SNX6-205ENST00000555648 ERV3-1Q14264 604 aa15.04■□□□□ -0
SNX6-205ENST00000555648 SKIDA1Q1XH10 827 aa15.04■□□□□ -0
SNX6-205ENST00000555648 CRTC2Q53ET0 693 aaPredicted RBP15.04■□□□□ -0
SNX6-205ENST00000555648 CAPRIN2Q6IMN6 1127 aaKnown RBP15.04■□□□□ -0
SNX6-205ENST00000555648 HOOK3Q86VS8 718 aa15.04■□□□□ -0
SNX6-205ENST00000555648 SERPINA9Q86WD7 417 aa15.04■□□□□ -0
SNX6-205ENST00000555648 PTRH1Q86Y79 214 aaKnown RBP15.04■□□□□ -0
SNX6-205ENST00000555648 TMEM126BQ8IUX1 230 aa15.04■□□□□ -0
SNX6-205ENST00000555648 CARFQ8N187 725 aa15.04■□□□□ -0
SNX6-205ENST00000555648 ACVR1CQ8NER5 493 aa15.04■□□□□ -0
SNX6-205ENST00000555648 RMDN2Q96LZ7 410 aa15.04■□□□□ -0
SNX6-205ENST00000555648 TTC1Q99614 292 aa15.04■□□□□ -0
SNX6-205ENST00000555648 TSGA10Q9BZW7 698 aa15.04■□□□□ -0
SNX6-205ENST00000555648 COG4Q9H9E3 785 aa15.04■□□□□ -0
SNX6-205ENST00000555648 LHX9Q9NQ69 397 aa15.04■□□□□ -0
SNX6-205ENST00000555648 NLE1Q9NVX2 485 aaPredicted RBP15.04■□□□□ -0
SNX6-205ENST00000555648 SMARCAL1Q9NZC9 954 aa15.04■□□□□ -0
SNX6-205ENST00000555648 SEMA5BQ9P283 1151 aa15.04■□□□□ -0
SNX6-205ENST00000555648 POLHQ9Y253 713 aa15.04■□□□□ -0
SNX6-205ENST00000555648 MRPS18BQ9Y676 258 aaKnown RBP15.04■□□□□ -0
SNX6-205ENST00000555648 COL6A6A6NMZ7 2263 aa15.04■□□□□ -0
SNX6-205ENST00000555648 ZFC3H1O60293 1989 aaKnown RBP15.04■□□□□ -0
SNX6-205ENST00000555648 ZNF462Q96JM2 2506 aa15.03■□□□□ -0
SNX6-205ENST00000555648 PIPSLA2A3N6 862 aa15.03■□□□□ -0
SNX6-205ENST00000555648 CDC14CA4D256 554 aa15.03■□□□□ -0
SNX6-205ENST00000555648 C21orf140B9A014 251 aa15.03■□□□□ -0
SNX6-205ENST00000555648 QSOX1O00391 747 aa15.03■□□□□ -0
SNX6-205ENST00000555648 DDX3YO15523 660 aaKnown RBP15.03■□□□□ -0
SNX6-205ENST00000555648 SUV39H1O43463 412 aa15.03■□□□□ -0
SNX6-205ENST00000555648 AP2A1O95782 977 aa15.03■□□□□ -0
SNX6-205ENST00000555648 IFNB1P01574 187 aa15.03■□□□□ -0
SNX6-205ENST00000555648 GSTM1P09488 218 aa15.03■□□□□ -0
SNX6-205ENST00000555648 STIP1P31948 543 aaKnown RBP15.03■□□□□ -0
SNX6-205ENST00000555648 RPS15P62841 145 aaKnown RBP15.03■□□□□ -0
SNX6-205ENST00000555648 TUBB4BP68371 445 aa15.03■□□□□ -0
SNX6-205ENST00000555648 GSTM4Q03013 218 aa15.03■□□□□ -0
SNX6-205ENST00000555648 MSLNQ13421 630 aaPredicted RBP15.03■□□□□ -0
SNX6-205ENST00000555648 LAMB3Q13751 1172 aa15.03■□□□□ -0
SNX6-205ENST00000555648 TUBB2AQ13885 445 aa15.03■□□□□ -0
SNX6-205ENST00000555648 KCTD11Q693B1 232 aa15.03■□□□□ -0
SNX6-205ENST00000555648 PWWP2BQ6NUJ5 590 aa15.03■□□□□ -0
SNX6-205ENST00000555648 PPP1R21Q6ZMI0 780 aa15.03■□□□□ -0
SNX6-205ENST00000555648 RNF10Q8N5U6 811 aaKnown RBP15.03■□□□□ -0
SNX6-205ENST00000555648 LILRA3Q8N6C8 439 aaPredicted RBP15.03■□□□□ -0
SNX6-205ENST00000555648 OR8K5Q8NH50 307 aa15.03■□□□□ -0
SNX6-205ENST00000555648 SEC14L1Q92503 715 aa15.03■□□□□ -0
SNX6-205ENST00000555648 CDKN2AIPNLQ96HQ2 116 aa15.03■□□□□ -0
SNX6-205ENST00000555648 TUBB2BQ9BVA1 445 aa15.03■□□□□ -0
SNX6-205ENST00000555648 FRMD8P1Q9BZ68 369 aaPredicted RBP15.03■□□□□ -0
SNX6-205ENST00000555648 TWSG1Q9GZX9 223 aa15.03■□□□□ -0
SNX6-205ENST00000555648 KCND1Q9NSA2 647 aa15.03■□□□□ -0
SNX6-205ENST00000555648 PIH1D1Q9NWS0 290 aaKnown RBP15.03■□□□□ -0
SNX6-205ENST00000555648 SMG1Q96Q15 3661 aaKnown RBP15.03■□□□□ -0
SNX6-205ENST00000555648 CCDC78A2IDD5 438 aa15.02■□□□□ -0
SNX6-205ENST00000555648 GOLGA6L3A6NEY3 463 aa15.02■□□□□ -0
SNX6-205ENST00000555648 ERI2A8K979 691 aaKnown RBP15.02■□□□□ -0
SNX6-205ENST00000555648 H7C0S8 307 aa15.02■□□□□ -0
SNX6-205ENST00000555648 SGTAO43765 313 aa15.02■□□□□ -0
SNX6-205ENST00000555648 KRT86O43790 486 aa15.02■□□□□ -0
SNX6-205ENST00000555648 CPNE3O75131 537 aaKnown RBP15.02■□□□□ -0
SNX6-205ENST00000555648 AP2A2O94973 939 aa15.02■□□□□ -0
SNX6-205ENST00000555648 NTRK1P04629 796 aa15.02■□□□□ -0
SNX6-205ENST00000555648 KLK3P07288 261 aaPredicted RBP15.02■□□□□ -0
SNX6-205ENST00000555648 F8A1P23610 371 aa15.02■□□□□ -0
SNX6-205ENST00000555648 CDC25BP30305 580 aa15.02■□□□□ -0
SNX6-205ENST00000555648 CDKN1CP49918 316 aaPredicted RBP15.02■□□□□ -0
SNX6-205ENST00000555648 CSRP3P50461 194 aa15.02■□□□□ -0
SNX6-205ENST00000555648 GDF10P55107 478 aa15.02■□□□□ -0
SNX6-205ENST00000555648 RPA4Q13156 261 aa15.02■□□□□ -0
SNX6-205ENST00000555648 KLF1Q13351 362 aaPredicted RBP15.02■□□□□ -0
SNX6-205ENST00000555648 ATP1A1-AS1Q5TC04 95 aa15.02■□□□□ -0
SNX6-205ENST00000555648 KLHDC8BQ8IXV7 354 aa15.02■□□□□ -0
SNX6-205ENST00000555648 D2HGDHQ8N465 521 aa15.02■□□□□ -0
SNX6-205ENST00000555648 SLC35B2Q8TB61 432 aa15.02■□□□□ -0
SNX6-205ENST00000555648 CT55Q8WUE5 264 aa15.02■□□□□ -0
SNX6-205ENST00000555648 UBE2Q2Q8WVN8 375 aa15.02■□□□□ -0
SNX6-205ENST00000555648 SLC7A5P2Q9GIP4 190 aa15.02■□□□□ -0
SNX6-205ENST00000555648 MVB12BQ9H7P6 319 aa15.02■□□□□ -0
SNX6-205ENST00000555648 ZNF71Q9NQZ8 489 aaPredicted RBP15.02■□□□□ -0
SNX6-205ENST00000555648 GUCA1BQ9UMX6 200 aa15.02■□□□□ -0
SNX6-205ENST00000555648 ZNF148Q9UQR1 794 aa15.02■□□□□ -0
SNX6-205ENST00000555648 R3HDM2Q9Y2K5 976 aaKnown RBP15.02■□□□□ -0
SNX6-205ENST00000555648 MGAQ8IWI9 3026 aa15.02□□□□□ -0.01
SNX6-205ENST00000555648 IGLV3-16A0A075B6K0 115 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 MKRN2OSH3BPM6 223 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 CREG1O75629 220 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 SCRG1O75711 98 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 TIAF1O95411 115 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 FTH1P02794 183 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 MSNP26038 577 aaKnown RBP15.01□□□□□ -0.01
SNX6-205ENST00000555648 FDFT1P37268 417 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 NSG1P42857 185 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 CD151P48509 253 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 KPNA2P52292 529 aaKnown RBP15.01□□□□□ -0.01
SNX6-205ENST00000555648 CDH17Q12864 832 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 GPR19Q15760 415 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 DBN1Q16643 649 aa15.01□□□□□ -0.01
SNX6-205ENST00000555648 SYTL3Q4VX76 610 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms