RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CD59P13987 128 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 MSH3P20585 1137 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 BGNP21810 368 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 AK4P27144 223 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 TEAD1P28347 426 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 PTPN4P29074 926 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 RXRGP48443 463 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 BLKP51451 505 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 ARHGAP8P85298 464 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 TMEM115Q12893 351 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 NFATC2Q13469 925 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 GTF2H3Q13889 308 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 CRYMQ14894 314 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SUZ12Q15022 739 aaKnown RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 PSAPL1Q6NUJ1 521 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 TRMT10BQ6PF06 316 aaKnown RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SLC30A9Q6PML9 568 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 PACS1Q6VY07 963 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 ADGRG6Q86SQ4 1221 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 NLRP8Q86W28 1048 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SERPINA9Q86WD7 417 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 TRAPPC5Q8IUR0 188 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 NAXDQ8IW45 347 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 RAVER1Q8IY67 606 aaKnown RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 PIANPQ8IYJ0 282 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SLC25A45Q8N413 288 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SAP25Q8TEE9 199 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 RANBP9Q96S59 729 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 CPNE1Q99829 537 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 CLPBQ9H078 707 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 OSGEPL1Q9H4B0 414 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 TRIM39Q9HCM9 518 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SPASTQ9UBP0 616 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 DCDC2Q9UHG0 476 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 SOX13Q9UN79 622 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 DNAJC16Q9Y2G8 782 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 TRBV23OR9-2A0A075B6M9 112 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 HMX2A2RU54 273 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 SNX2O60749 519 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 CCDC22O60826 627 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 SNNO75324 88 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 HAUS5O94927 633 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 VAPBO95292 243 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 BPGMP07738 259 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 ANXA6P08133 673 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 T-ENOLP0DO92 83 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 OCRLQ01968 901 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 CACNG1Q06432 222 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 FASTKD1Q53R41 847 aaKnown RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 TAF1BQ53T94 588 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 LDLRAP1Q5SW96 308 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 GRTP1Q5TC63 336 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 PDPK2PQ6A1A2 396 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 AFTPHQ6ULP2 937 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 CDHR3Q6ZTQ4 885 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 SNX20Q7Z614 316 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 MTDHQ86UE4 582 aaKnown RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 NUDCD3Q8IVD9 361 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 KIF2BQ8N4N8 673 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 BEND7Q8N7W2 519 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 UNC13CQ8NB66 2214 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 OR4L1Q8NH43 312 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 RFWD2Q8NHY2 731 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 ISL2Q96A47 359 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 SLC7A6OSQ96CW6 309 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 SGF29Q96ES7 293 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 DCUN1D1Q96GG9 259 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 FCRL3Q96P31 734 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 OR2M4Q96R27 311 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 BOCQ9BWV1 1114 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 TMEM120AQ9BXJ8 343 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 STN1Q9H668 368 aaKnown RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 KCNK13Q9HB14 408 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 CATSPERZQ9NTU4 200 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 NFKBIL1Q9UBC1 381 aaPredicted RBP9.7□□□□□ -0.86
PSEN1-213ENST00000555386 GULP1Q9UBP9 304 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 KCNK6Q9Y257 313 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 SLC17A4Q9Y2C5 497 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 RPS6KL1Q9Y6S9 549 aa9.7□□□□□ -0.86
PSEN1-213ENST00000555386 A0A0G2JND7 137 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 NEMP2A6NFY4 417 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 B4DGG1 531 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TRIM38O00635 465 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 TNFRSF10CO14798 259 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 GIPC1O14908 333 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 YY2O15391 372 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 YKT6O15498 198 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 GRID2O43424 1007 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 SIGLEC6O43699 453 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 NUAK1O60285 661 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 USP1O94782 785 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 CALB2P22676 271 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 GP5P40197 560 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ACTR1BP42025 376 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 GRK6P43250 576 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 CTSCP53634 463 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ACTR1AP61163 376 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 CTBSQ01459 385 aa9.69□□□□□ -0.86
PSEN1-213ENST00000555386 ILF3Q12906 894 aaKnown RBP eCLIP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms