RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 NAPGQ99747 312 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CTRCQ99895 268 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CATSPERZQ9NTU4 200 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SLC39A1Q9NY26 324 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SOX13Q9UN79 622 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PCDHGA7Q9Y5G6 932 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
TRAPPC6B-205ENST00000555269 GOLGA6L10A0A0M3HER8 536 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SDR42E2A6NKP2 422 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 F7P08709 466 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ABCG1P45844 678 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SARNPP82979 210 aaKnown RBP12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PRKG2Q13237 762 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CASC4Q6P4E1 433 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PACS1Q6VY07 963 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CERS6Q6ZMG9 384 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FAM92BQ6ZTR7 304 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KRT222Q8N1A0 295 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 NAT8LQ8N9F0 302 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ZNF454Q8N9F8 522 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MCUQ8NE86 351 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 OR4E2Q8NGC2 313 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 LKAAEAR1Q8TD35 194 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ELMO1Q92556 727 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PEX13Q92968 403 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TAAR9Q96RI9 348 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TTC1Q99614 292 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 EPB41L1Q9H4G0 881 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 APMAPQ9HDC9 416 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IL1RAPL1Q9NZN1 696 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SLC24A2Q9UI40 661 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 B3GALT1Q9Y5Z6 326 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 COLEC10Q9Y6Z7 277 aa12.11□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SLC5A10A0PJK1 596 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 OR6C74A6NCV1 312 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 EFSO43281 561 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 NDUFS3O75489 264 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RASSF9O75901 435 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 OR56A5P0C7T3 313 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IVDP26440 423 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CCR7P32248 378 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MLLT3P42568 568 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SH3BP2P78314 561 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MC2RQ01718 297 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SRSF6Q13247 344 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CLN3Q13286 438 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PLCL1Q15111 1095 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ANKRD20A4Q4UJ75 823 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CACHD1Q5VU97 1274 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ANKS6Q68DC2 871 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 BMPERQ8N8U9 685 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 GRK7Q8WTQ7 553 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TFGQ92734 400 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SIGLEC10Q96LC7 697 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PPM1MQ96MI6 270 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 SERPINB12Q96P63 405 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 DPH1Q9BZG8 443 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 XKR8Q9H6D3 395 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 KIR3DX1Q9H7L2 352 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 VPS37BQ9H9H4 285 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MRM3Q9HC36 420 aaKnown RBP12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CPNE5Q9HCH3 593 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 HRASLS2Q9NWW9 162 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PCYOX1Q9UHG3 505 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ITPR1Q14643 2758 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MN1Q10571 1320 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CHD6Q8TD26 2715 aa12.1□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ZNF106Q9H2Y7 1883 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IGHV5-51A0A0C4DH38 117 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 B4E171 279 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 IFRD1O00458 451 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 BANF1O75531 89 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FTH1P02794 183 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MLNP12872 115 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 POLR2CP19387 275 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ACADLP28330 430 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FMO4P31512 558 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PPARGP37231 505 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 TSPAN7P41732 249 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CAPZBP47756 277 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 CD151P48509 253 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ABRQ12979 859 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RPA4Q13156 261 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ZNF789Q5FWF6 425 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 ZNF449Q6P9G9 518 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 FBXO38Q6PIJ6 1188 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 PDZD3Q86UT5 571 aa12.09□□□□□ -0.47
TRAPPC6B-205ENST00000555269 VRK3Q8IV63 474 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms