RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-208ENST00000554813 ASPSCR1Q9BZE9 553 aa12.92□□□□□ -0.34
APEX1-208ENST00000554813 KIR3DX1Q9H7L2 352 aa12.92□□□□□ -0.34
APEX1-208ENST00000554813 MVB12BQ9H7P6 319 aa12.92□□□□□ -0.34
APEX1-208ENST00000554813 SLC39A1Q9NY26 324 aa12.92□□□□□ -0.34
APEX1-208ENST00000554813 SLC24A2Q9UI40 661 aa12.92□□□□□ -0.34
APEX1-208ENST00000554813 ACSL6Q9UKU0 697 aa12.92□□□□□ -0.34
APEX1-208ENST00000554813 FAM237BA0A1B0GVD1 139 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 CCDC188H7C350 402 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 PRMT5O14744 637 aaPredicted RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 KLK10O43240 276 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 PRAMEF10O60809 474 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 RASSF9O75901 435 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 ANKRD34CP0C6C1 535 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 CD82P27701 267 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 ITPKBP27987 946 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 PDHA2P29803 388 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 PREPP48147 710 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 GFERP55789 205 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 RAB15P59190 212 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 DR1Q01658 176 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 PTK6Q13882 451 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 SEMA3AQ14563 771 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 BRD3Q15059 726 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 SYTL3Q4VX76 610 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 PTRHD1Q6GMV3 140 aaKnown RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 KIAA0930Q6ICG6 404 aaPredicted RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 ARMC6Q6NXE6 501 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 IRGCQ6NXR0 463 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 DUS1LQ6P1R4 473 aaKnown RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 LRRC6Q86X45 466 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 KLHL7Q8IXQ5 586 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 ACVR1CQ8NER5 493 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 ASZ1Q8WWH4 475 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 RSC1A1Q92681 617 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 TFGQ92734 400 aaPredicted RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 ART4Q93070 314 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 TCF12Q99081 682 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 DDA1Q9BW61 102 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 HRASLS2Q9NWW9 162 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 OCIAD1Q9NX40 245 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 MARCH4Q9P2E8 410 aaPredicted RBP12.91□□□□□ -0.34
APEX1-208ENST00000554813 PCDHGA3Q9Y5H0 932 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 MAD1L1Q9Y6D9 718 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 CACNA1BQ00975 2339 aa12.91□□□□□ -0.34
APEX1-208ENST00000554813 SLC5A10A0PJK1 596 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 C9orf172C9J069 976 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 DNALI1O14645 258 aaPredicted RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 KPNA5O15131 536 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 ARNTP27540 789 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 CASQ1P31415 396 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 PTGIRP43119 386 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 LEPRP48357 1165 aaKnown RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 UCNP55089 124 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 MC2RQ01718 297 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 TLE3Q04726 772 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 BOP1Q14137 746 aaKnown RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 DHX34Q14147 1143 aaKnown RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 RNF187Q5TA31 235 aaPredicted RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 RNASEH2BQ5TBB1 312 aaKnown RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 CACHD1Q5VU97 1274 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 NEPROQ6NW34 567 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 FAM92BQ6ZTR7 304 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 PRSS42Q7Z5A4 293 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 TMEM135Q86UB9 458 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 PDZD3Q86UT5 571 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 HOOK3Q86VS8 718 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 OOSP2Q86WS3 158 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 PHC3Q8NDX5 983 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 OR4E2Q8NGC2 313 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 LCN9Q8WX39 176 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 JPH3Q8WXH2 748 aaPredicted RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 TEFMQ96QE5 360 aaKnown RBP12.9□□□□□ -0.34
APEX1-208ENST00000554813 PANX3Q96QZ0 392 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 ZPBPQ9BS86 351 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 SRMSQ9H3Y6 488 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 FBXO8Q9NRD0 319 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 GNPTGQ9UJJ9 305 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 VPS9D1Q9Y2B5 631 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 PCDHB11Q9Y5F2 797 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 RPS6KL1Q9Y6S9 549 aa12.9□□□□□ -0.34
APEX1-208ENST00000554813 UBA6A0AVT1 1052 aaPredicted RBP12.89□□□□□ -0.35
APEX1-208ENST00000554813 OR6C74A6NCV1 312 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 OR5K3A6NET4 321 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 BHMG1C9JSJ3 638 aaPredicted RBP12.89□□□□□ -0.35
APEX1-208ENST00000554813 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 SMAPO00193 183 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 APOA4P06727 396 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 ITGB6P18564 788 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 OGNP20774 298 aaKnown RBP12.89□□□□□ -0.35
APEX1-208ENST00000554813 RPS3P23396 243 aaKnown RBP eCLIP12.89□□□□□ -0.359e-7■■■■□ 26.7
APEX1-208ENST00000554813 CCR7P32248 378 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 MAGEA3P43357 314 aa12.89□□□□□ -0.35
APEX1-208ENST00000554813 ARCN1P48444 511 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms