RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MAPK4P31152 587 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CASP14P31944 242 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TALDO1P37837 337 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GP5P40197 560 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 OR1G1P47890 313 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 NPY2RP49146 381 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 HNMTP50135 292 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ALDH5A1P51649 535 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 VAV2P52735 878 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RAD23BP54727 409 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PER3P56645 1201 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 KRTAP10-9P60411 292 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GNG11P61952 73 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RPL10AP62906 217 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MPP1Q00013 466 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GHRHRQ02643 423 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 BFSP1Q12934 665 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 STRN3Q13033 797 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PPIGQ13427 754 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PKP1Q13835 747 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RCN2Q14257 317 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CAPRIN1Q14444 709 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 FASTKD3Q14CZ7 662 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 EFTUD2Q15029 972 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MLC1Q15049 377 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 NECTIN1Q15223 517 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TRADDQ15628 312 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PFKFB3Q16875 520 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GTDC1Q4AE62 458 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TCHHL1Q5QJ38 904 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 THEM4Q5T1C6 240 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 C1orf146Q5VVC0 180 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MFSD14CQ5VZR4 134 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ITPRIPL1Q6GPH6 555 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 WDR73Q6P4I2 378 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 APOA5Q6Q788 366 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF852Q6ZMS4 543 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 DCDC5Q6ZRR9 648 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ENOSF1Q7L5Y1 443 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TMPRSS9Q7Z410 1059 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CDKL3Q8IVW4 592 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CLEC4FQ8N1N0 589 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RIBC1Q8N443 379 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 LNX2Q8N448 690 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 AVL9Q8NBF6 648 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TRPV1Q8NER1 839 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SLC24A4Q8NFF2 622 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 OR52N1Q8NH53 320 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CLHC1Q8NHS4 586 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RAB3IL1Q8TBN0 382 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MCOLN3Q8TDD5 553 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 DEPDC1BQ8WUY9 529 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 FAM151AQ8WW52 585 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 AUTS2Q8WXX7 1259 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TANKQ92844 425 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MAP4K1Q92918 833 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 BORCS5Q969J3 196 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GRAMD1AQ96CP6 724 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 HSPBAP1Q96EW2 488 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF845Q96IR2 970 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 FAR2Q96K12 515 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CNOT6LQ96LI5 555 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MMS19Q96T76 1030 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RMDN3Q96TC7 470 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PLIN2Q99541 437 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 C17orf62Q9BQA9 187 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SLC26A6Q9BXS9 759 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 WDR12Q9GZL7 423 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 NAPBQ9H115 298 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RNF41Q9H4P4 317 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SPACA1Q9HBV2 294 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SLC35C2Q9NQQ7 365 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 RBM12Q9NTZ6 932 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TXLNGQ9NUQ3 528 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 DDX19AQ9NUU7 478 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 NUDT15Q9NV35 164 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GDAP2Q9NXN4 497 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CYP39A1Q9NYL5 469 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 FAM30AQ9NZY2 134 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 NYAP2Q9P242 653 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 IPO11Q9UI26 975 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GNPTGQ9UJJ9 305 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SNX6Q9UNH7 406 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ACTL7AQ9Y615 435 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SMCHD1A6NHR9 2005 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CHD6Q8TD26 2715 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 FAM208BQ5VWN6 2430 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ATG2AQ2TAZ0 1938 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PI4KAP2A4QPH2 592 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM210A6NLX4 147 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SIGLEC16A6NMB1 481 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 EVPLLA8MZ36 301 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TCP11X1B4DZS4 312 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ALG1L2C9J202 215 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 H7C0S8 307 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CCDC22O60826 627 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ATG13O75143 517 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PTP4A3O75365 173 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms