RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MFSD7Q6UXD7 560 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TREML4Q6UXN2 200 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 NAPRTQ6XQN6 538 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CLEC17AQ6ZS10 378 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TRIM73Q86UV7 250 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PPP1R3BQ86XI6 285 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 FAM20CQ8IXL6 584 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TAB3Q8N5C8 712 aaPredicted RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TRAM1L1Q8N609 369 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 Q8NA96 180 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SIDT2Q8NBJ9 832 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PHC3Q8NDX5 983 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 OR4E2Q8NGC2 313 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CPT1CQ8TCG5 803 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 BLOC1S5Q8TDH9 187 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 KLHL6Q8WZ60 621 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 SH3KBP1Q96B97 665 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 FAF2Q96CS3 445 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 IMP4Q96G21 291 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 OXNAD1Q96HP4 312 aaPredicted RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TEFMQ96QE5 360 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 LYSMD1Q96S90 227 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CHP1Q99653 195 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 DPYSL5Q9BPU6 564 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF768Q9H5H4 540 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 STN1Q9H668 368 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 XKR8Q9H6D3 395 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 GLOD4Q9HC38 313 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 DNAJB12Q9NXW2 375 aaKnown RBP6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CIDEBQ9UHD4 219 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TUBD1Q9UJT1 453 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 PADI1Q9ULC6 663 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 POLHQ9Y253 713 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 ARL5AQ9Y689 179 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 TACC2O95359 2948 aa6.68□□□□□ -1.34
PRPF40B-214ENST00000551320 CCDC88CQ9P219 2028 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 TCP11X1B4DZS4 312 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 APOL1O14791 398 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 CLDN1O95832 211 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ANKRD34CP0C6C1 535 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 FGF5P12034 268 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 IDSP22304 550 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 NFKBIAP25963 317 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 PTPN3P26045 913 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 LMAN1P49257 510 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF135P52742 658 aaPredicted RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 UBASH3AP57075 661 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 IFI35P80217 286 aaPredicted RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 WASHC5Q12768 1159 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 PRKG2Q13237 762 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 LAMB3Q13751 1172 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 SPARCL1Q14515 664 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 PPP2R5EQ16537 467 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 KYNUQ16719 465 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 DEFB110Q30KQ9 67 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 RALGPS1Q5JS13 557 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 DNTTIP2Q5QJE6 756 aaKnown RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 GPRC6AQ5T6X5 926 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 C1orf189Q5VU69 101 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 TIGD7Q6NT04 549 aaPredicted RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 TCTN3Q6NUS6 607 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 KDELC1Q6UW63 502 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ABRAXAS1Q6UWZ7 409 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ZC3H18Q86VM9 953 aaKnown RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 TMEM126BQ8IUX1 230 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 GOLGA6L1Q8N7Z2 621 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ENDOVQ8N8Q3 282 aaKnown RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 FDCSPQ8NFU4 85 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 IPMKQ8NFU5 416 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 OR1L3Q8NH93 324 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC35G2Q8TBE7 412 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 HDAC11Q96DB2 347 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 TCTN2Q96GX1 697 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 RMDN2Q96LZ7 410 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 GORASP1Q9BQQ3 440 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 MESP1Q9BRJ9 268 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ZNF670Q9BS34 389 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ZPBPQ9BS86 351 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 SLC25A23Q9BV35 468 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 NUDT9Q9BW91 350 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 HEMGNQ9BXL5 484 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ADGRE3Q9BY15 652 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ING2Q9H160 280 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 ZBTB20Q9HC78 741 aaPredicted RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 FGF21Q9NSA1 209 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 PIH1D1Q9NWS0 290 aaKnown RBP6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 HRASLS2Q9NWW9 162 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 KCTD5Q9NXV2 234 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 RARRES3Q9UL19 164 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 CAPN11Q9UMQ6 739 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 KLHL20Q9Y2M5 609 aa6.67□□□□□ -1.34
PRPF40B-214ENST00000551320 DOPEY1Q5JWR5 2465 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 PIKFYVEQ9Y2I7 2098 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 UBA6A0AVT1 1052 aaPredicted RBP6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 OR5K4A6NMS3 321 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 SMTNL1A8MU46 457 aa6.66□□□□□ -1.34
PRPF40B-214ENST00000551320 BTN3A3O00478 584 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms