RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LIMA1Q9UHB6 759 aaKnown RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 G3BP2Q9UN86 482 aaKnown RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 HBS1LQ9Y450 684 aaKnown RBP4.97□□□□□ -1.61
SCAF11-214ENST00000550893 ZNF106Q9H2Y7 1883 aaKnown RBP4.96□□□□□ -1.61
SCAF11-214ENST00000550893 KIF26BQ2KJY2 2108 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 IGLV3-10A0A075B6K4 115 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 GOLGA6L4A6NEF3 574 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 LGALS16A8MUM7 142 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FAM72CH0Y354 149 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 SLC9A3R1O14745 358 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 SLC30A4O14863 429 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FRS3O43559 492 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TSPAN6O43657 245 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ACSL4O60488 711 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 LRP3O75074 770 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 GRAP2O75791 330 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 CNTN5O94779 1100 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ADCY5O95622 1261 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TRUB2O95900 331 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TOP3BO95985 862 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 APODP05090 189 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF806P0C7X5 589 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 UNGP13051 313 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 HOXB2P14652 356 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 BRAFP15056 766 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 CYP11B1P15538 503 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FPR3P25089 353 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 EPHB2P29323 1055 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 DRD3P35462 400 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 STK19P49842 368 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 COPB1P53618 953 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 LIMK1P53667 647 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 GSCP56915 257 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FAM193AP78312 1265 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 SSBP2P81877 361 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ALFQ53S48 1182 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 DCAF6Q58WW2 860 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 MTX3Q5HYI7 312 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 CEP78Q5JTW2 689 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FAM72AQ5TYM5 149 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 PAPD7Q5XG87 772 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FCRL6Q6DN72 434 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FAM72DQ6L9T8 149 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 KIRREL2Q6UWL6 708 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 GBP6Q6ZN66 633 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 C1QL2Q7Z5L3 287 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 KCTD20Q7Z5Y7 419 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FAM72BQ86X60 149 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 APCDD1Q8J025 514 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 SPARTQ8N0X7 666 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 DEFB106AQ8N104 65 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 PNLDC1Q8NA58 520 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TSTD1Q8NFU3 115 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 DNAJB14Q8TBM8 379 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 HMGB4Q8WW32 186 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 AZIN2Q96A70 460 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TTC17Q96AE7 1141 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 DAZAP1Q96EP5 407 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ZNF419Q96HQ0 510 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 NAF1Q96HR8 494 aaKnown RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 NSMCE3Q96MG7 304 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 NAP1L5Q96NT1 182 aaPredicted RBP4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ERGIC2Q96RQ1 377 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 C1QTNF7Q9BXJ2 289 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TRIM7Q9C029 511 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 SEMA4CQ9C0C4 833 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 FAM204AQ9H8W3 233 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ABCC13Q9NSE7 274 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ABCB8Q9NUT2 735 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ASNSD1Q9NWL6 643 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 ARHGEF38Q9NXL2 777 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 TAS2R14Q9NYV8 317 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 EHD2Q9NZN4 543 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 DEC1Q9P2X7 70 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 PILRBQ9UKJ0 227 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 KIAA1257Q9ULG3 409 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 STON1Q9Y6Q2 735 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 BOD1L1Q8NFC6 3051 aa4.96□□□□□ -1.62
SCAF11-214ENST00000550893 RP1P56715 2156 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 GOLGA4Q13439 2230 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 ISM1B1AKI9 464 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 AP5Z1O43299 807 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 THAP12O43422 761 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 ZMPSTE24O75844 475 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 IGHV4-34P06331 123 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CTSLP07711 333 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CCDC192P0DO97 292 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 RALAP11233 206 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 KRT5P13647 590 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 TCF4P15884 667 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 MMP8P22894 467 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 KELP23276 732 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 EEF1GP26641 437 aaKnown RBP4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CERS1P27544 350 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 NTSR1P30989 418 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CSKP41240 450 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 CXCR3P49682 368 aa4.95□□□□□ -1.62
SCAF11-214ENST00000550893 HDAC4P56524 1084 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms