RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 RPL4P36578 427 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 PNLIPRP1P54315 467 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 TNK2Q07912 1038 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 EIF4HQ15056 248 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 ADRM1Q16186 407 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 ARMC8Q8IUR7 673 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 RNF168Q8IYW5 571 aaPredicted RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 RMND5BQ96G75 393 aaPredicted RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 SIGLEC10Q96LC7 697 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 RAB11FIP5Q9BXF6 653 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 SSU72Q9NP77 194 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 C1orf109Q9NX04 203 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 SEC14L3Q9UDX4 400 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 PRPF19Q9UMS4 504 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 TPRKBQ9Y3C4 175 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 PRKAB1Q9Y478 270 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 TEX264Q9Y6I9 313 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 PIP5K1BO14986 540 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 KLF8O95600 359 aaPredicted RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 FEN1P39748 380 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 RUNX3Q13761 415 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 TTC23Q5W5X9 447 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 ANKRD46Q86W74 232 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 RALGPS2Q86X27 583 aaPredicted RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 TMEM25Q86YD3 366 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 FBXW8Q8N3Y1 598 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 DEFB119Q8N690 84 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 REXO5Q96IC2 774 aaKnown RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 ZNF641Q96N77 438 aaPredicted RBP11.65□□□□□ -0.54
CHERP-203ENST00000546361 VPS35Q96QK1 796 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 FNDC11Q9BVV2 318 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 ARL8BQ9NVJ2 186 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 GALPQ9UBC7 116 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 C3orf18Q9UK00 162 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 PCDHGB3Q9Y5G1 929 aa11.65□□□□□ -0.54
CHERP-203ENST00000546361 SOCS5O75159 536 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 PRPS2P11908 318 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ELAVL3Q14576 367 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 QPCTQ16769 361 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ALG11Q2TAA5 492 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 MSS51Q4VC12 460 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 RBM20Q5T481 1227 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 KBTBD6Q86V97 674 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ZNF248Q8NDW4 579 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 OR52L1Q8NGH7 329 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 CCM2Q9BSQ5 444 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 EBPLQ9BY08 206 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 POLR1BQ9H9Y6 1135 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 RNPEPL1Q9HAU8 725 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 SAGE1Q9NXZ1 904 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 RUVBL1Q9Y265 456 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 TMEM98Q9Y2Y6 226 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 GRID2O43424 1007 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 MAN1A2O60476 641 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ERN1O75460 977 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 CST1P01037 141 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 TNFP01375 233 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 LAMP2P13473 410 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 EFNA1P20827 205 aaPredicted RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 DEF8Q6ZN54 512 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ERN2Q76MJ5 926 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 TRIM74Q86UV6 250 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 COMMD2Q86X83 199 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 KLHDC7BQ96G42 594 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 EFCAB11Q9BUY7 163 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 HERC2P3Q9BVR0 1158 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 WDR6Q9NNW5 1121 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 NDUFA13Q9P0J0 144 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 SLX4Q8IY92 1834 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 MYH10P35580 1976 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 BBIP1A8MTZ0 92 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ZNF487B1APH4 448 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 IRF9Q00978 393 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ZNF805Q5CZA5 627 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ZNF783Q6ZMS7 281 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 TRPV1Q8NER1 839 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 TLCD1Q96CP7 247 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 SH3GL2Q99962 352 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 DPYSL5Q9BPU6 564 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 CNPPD1Q9BV87 410 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 MAT2BQ9NZL9 334 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ADGRE2Q9UHX3 823 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 MRTO4Q9UKD2 239 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 A0A1W2PP55 124 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 NPHS1O60500 1241 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 TULP3O75386 442 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 RYKP34925 604 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 DYNC1I2Q13409 638 aaKnown RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 UAP1L1Q3KQV9 507 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 BEND5Q7L4P6 421 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 ZNF572Q7Z3I7 529 aaPredicted RBP11.64□□□□□ -0.55
CHERP-203ENST00000546361 ULK2Q8IYT8 1036 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 SMPDL3AQ92484 453 aa11.64□□□□□ -0.55
CHERP-203ENST00000546361 RORBQ92753 470 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms