RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FERD3LQ96RJ6 166 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 DESI2Q9BSY9 194 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 TMEM121Q9BTD3 319 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 SRMSQ9H3Y6 488 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 FAM96AQ9H5X1 160 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 MVB12BQ9H7P6 319 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 FGF21Q9NSA1 209 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 CROTQ9UKG9 612 aa9.13□□□□□ -0.95
YBX3-218ENST00000546298 COL6A6A6NMZ7 2263 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 SPEGQ15772 3267 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 IGLV3-16A0A075B6K0 115 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 HEATR9A2RTY3 570 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 C21orf140B9A014 251 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 E7EVH7 732 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 CCL22O00626 93 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 SGTAO43765 313 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 KATNA1O75449 491 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 KLK3P07288 261 aaPredicted RBP9.12□□□□□ -0.95
YBX3-218ENST00000546298 FOLR1P15328 257 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 ZNF28P17035 718 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 CDH3P22223 829 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 PPARGP37231 505 aaPredicted RBP9.12□□□□□ -0.95
YBX3-218ENST00000546298 NSG1P42857 185 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 LMAN1P49257 510 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 GSDMDP57764 484 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 TUBB4BP68371 445 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 KCNC4Q03721 635 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 CDH17Q12864 832 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 DNASE1L3Q13609 305 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 TUBB2AQ13885 445 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 ITIH4Q14624 930 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 POU6F1Q14863 301 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 DEFB109BQ30KR1 87 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 LYPLAL1Q5VWZ2 237 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 DUS1LQ6P1R4 473 aaKnown RBP9.12□□□□□ -0.95
YBX3-218ENST00000546298 PPP1R21Q6ZMI0 780 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 NLRP9Q7RTR0 991 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 OR4E2Q8NGC2 313 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 C9orf43Q8TAL5 461 aaPredicted RBP9.12□□□□□ -0.95
YBX3-218ENST00000546298 TUBB2BQ9BVA1 445 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 GPR87Q9BY21 358 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 COG4Q9H9E3 785 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 FANCEQ9HB96 536 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 SYTL2Q9HCH5 934 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 LHX9Q9NQ69 397 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 C1GALT1Q9NS00 363 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 KCND1Q9NSA2 647 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 SOHLH2Q9NX45 425 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 SMARCAL1Q9NZC9 954 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 GUCA1BQ9UMX6 200 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 ZNF148Q9UQR1 794 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 POLHQ9Y253 713 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 BTRCQ9Y297 605 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 R3HDM2Q9Y2K5 976 aaKnown RBP9.12□□□□□ -0.95
YBX3-218ENST00000546298 PCDHGA6Q9Y5G7 932 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 ZFHX4Q86UP3 3567 aa9.12□□□□□ -0.95
YBX3-218ENST00000546298 PIPSLA2A3N6 862 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 GSAPA4D1B5 854 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 MROH6A6NGR9 719 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 LIN7AO14910 233 aaPredicted RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 SUV39H1O43463 412 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 LIASO43766 372 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 KDM1AO60341 852 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 CPNE3O75131 537 aaKnown RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 CREG1O75629 220 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 WISP1O95388 367 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 IFNB1P01574 187 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 FTH1P02794 183 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 EBLN1P0CF75 366 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 POLR2CP19387 275 aaPredicted RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 PSMA3P25788 255 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 MSNP26038 577 aaKnown RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 OAS2P29728 719 aaKnown RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 GDF10P55107 478 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 PPP1CAP62136 330 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 RPS15P62841 145 aaKnown RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 ERV3-1Q14264 604 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 RPS6KA1Q15418 735 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 DBN1Q16643 649 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 PWWP2BQ6NUJ5 590 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 CERS6Q6ZMG9 384 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 HOOK3Q86VS8 718 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 SLC13A5Q86YT5 568 aaPredicted RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 TMEM126BQ8IUX1 230 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 TAB3Q8N5C8 712 aaPredicted RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 CCDC89Q8N998 374 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 OR52K1Q8NGK4 314 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 NAT14Q8WUY8 206 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 TFGQ92734 400 aaPredicted RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 TWSG1Q9GZX9 223 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 OR52A5Q9H2C5 316 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 TFB2MQ9H5Q4 396 aaKnown RBP9.11□□□□□ -0.95
YBX3-218ENST00000546298 CLMPQ9H6B4 373 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 ETNK1Q9HBU6 452 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 LATS2Q9NRM7 1088 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 ANAPC2Q9UJX6 822 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 POMT2Q9UKY4 750 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 RIMKLBQ9ULI2 386 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 CAPN6Q9Y6Q1 641 aa9.11□□□□□ -0.95
YBX3-218ENST00000546298 SPTA1P02549 2419 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms