RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 G3V2T6 193 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 H0Y626 953 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 H0YAE9 185 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 COCHO43405 550 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 TRIM16O95361 564 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ESR1P03372 595 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 MAP4P27816 1152 aaKnown RBP15.53■□□□□ 0.08
LDLR-204ENST00000545707 MZF1P28698 734 aaPredicted RBP15.53■□□□□ 0.08
LDLR-204ENST00000545707 CAP1Q01518 475 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 NFATC3Q12968 1075 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 KIAA0040Q15053 153 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CRY1Q16526 586 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 GPR162Q16538 588 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 PHKG1Q16816 387 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 FAM26DQ5JW98 314 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SPANXN4Q5MJ08 99 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 PTRHD1Q6GMV3 140 aaKnown RBP15.53■□□□□ 0.08
LDLR-204ENST00000545707 XAF1Q6GPH4 301 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ZNF773Q6PK81 442 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 MBOAT1Q6ZNC8 495 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ZDHHC13Q8IUH4 622 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ABI1Q8IZP0 508 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ACDQ96AP0 544 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 AURKBQ96GD4 344 aaPredicted RBP15.53■□□□□ 0.08
LDLR-204ENST00000545707 GLT1D1Q96MS3 346 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 EGFL8Q99944 293 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 NUDT4Q9NZJ9 180 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ZNHIT2Q9UHR6 403 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SLC30A1Q9Y6M5 507 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 K7ERQ8 282 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ARNTLO00327 626 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 PFDN6O15212 129 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CLDN11O75508 207 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 B3GALT4O96024 378 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CST1P01037 141 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 NPPAP01160 153 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 MBL2P11226 248 aaPredicted RBP15.53■□□□□ 0.08
LDLR-204ENST00000545707 SLC11A1P49279 550 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CLCN4P51793 760 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SEMG2Q02383 582 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 PRKCZQ05513 592 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 TRAF7Q6Q0C0 670 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 Q6ZNX1 250 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CROCCP3Q8IVE0 287 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 MSRB3Q8IXL7 192 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 C10orf111Q8N326 155 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SLC13A3Q8WWT9 602 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 GTF2H4Q92759 462 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SPATA17Q96L03 361 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CSF3RQ99062 836 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 TM6SF2Q9BZW4 377 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 AMBRA1Q9C0C7 1298 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 COMMD8Q9NX08 183 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SMPD4Q9NXE4 827 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 SLC25A37Q9NYZ2 338 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 IL17CQ9P0M4 197 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 KLQ9UEF7 1012 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ZNF711Q9Y462 761 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 CCL27Q9Y4X3 112 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 U3KQV3 271 aa15.53■□□□□ 0.08
LDLR-204ENST00000545707 ILVBLA1L0T0 632 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 PRMT5O14744 637 aaPredicted RBP15.52■□□□□ 0.08
LDLR-204ENST00000545707 GMNNO75496 209 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 PRKD3O94806 890 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 RPLP2P05387 115 aaKnown RBP15.52■□□□□ 0.08
LDLR-204ENST00000545707 AGXTP21549 392 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 GKP32189 559 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 FAM189BP81408 668 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 BFSP2Q13515 415 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 PCBP2Q15366 365 aaKnown RBP eCLIP15.52■□□□□ 0.088e-6■■■■□ 24
LDLR-204ENST00000545707 CXorf57Q6NSI4 855 aaKnown RBP15.52■□□□□ 0.08
LDLR-204ENST00000545707 FUT10Q6P4F1 479 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 SPESP1Q6UW49 350 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 TMEM179BQ7Z7N9 219 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 LIX1Q8N485 282 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 SMYD1Q8NB12 490 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 ITCHQ96J02 903 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 ZIC5Q96T25 663 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.52■□□□□ 0.083e-6■□□□□ 10.6
LDLR-204ENST00000545707 RNF38Q9H0F5 515 aa15.52■□□□□ 0.08
LDLR-204ENST00000545707 ARVCFO00192 962 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 GNGT2O14610 69 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 TULP3O75386 442 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 STC2O76061 302 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 PRSS23O95084 383 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 ZBTB11O95625 1053 aaPredicted RBP15.52■□□□□ 0.07
LDLR-204ENST00000545707 ALDH2P05091 517 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 PSMA3P25788 255 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 TTKP33981 857 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 BMXP51813 675 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 KPNA1P52294 538 aaPredicted RBP15.52■□□□□ 0.07
LDLR-204ENST00000545707 MLLT10P55197 1068 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 TPD52P55327 224 aaPredicted RBP15.52■□□□□ 0.07
LDLR-204ENST00000545707 MAPKAPK3Q16644 382 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 CTU2Q2VPK5 515 aaKnown RBP15.52■□□□□ 0.07
LDLR-204ENST00000545707 SLC44A4Q53GD3 710 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 THAP5Q7Z6K1 395 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 RBM23Q86U06 439 aaKnown RBP15.52■□□□□ 0.07
LDLR-204ENST00000545707 SERPINA9Q86WD7 417 aa15.52■□□□□ 0.07
LDLR-204ENST00000545707 FRS2Q8WU20 508 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms