RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ZNF691Q5VV52 312 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ATG9BQ674R7 924 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 IL31Q6EBC2 164 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 IL27RAQ6UWB1 636 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 SCIMPQ6UWF3 145 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 GOLGA7Q7Z5G4 137 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 EID3Q8N140 333 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 SIDT2Q8NBJ9 832 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ZNF784Q8NCA9 323 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 EEF1AKMT1Q8WVE0 214 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 FBXO32Q969P5 355 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 CSF3RQ99062 836 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 FUNDC2Q9BWH2 189 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ACTR8Q9H981 624 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 UBA2Q9UBT2 640 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 EIF3LQ9Y262 564 aaKnown RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 POLR3HQ9Y535 204 aaPredicted RBP13.51□□□□□ -0.25
VPS33A-208ENST00000543633 PCDHB1Q9Y5F3 818 aa13.51□□□□□ -0.25
VPS33A-208ENST00000543633 ELOVL7A1L3X0 281 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 M0QX08 132 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 SLC28A1O00337 649 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 SLC1A7O00341 560 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 SLC22A1O15245 554 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 INSIG1O15503 277 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 B4GAT1O43505 415 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 UGT2B11O75310 529 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 GJB3O75712 270 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 GABARAPO95166 117 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 IL6P05231 212 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 ALOX5P09917 674 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 OR4Q2P0C623 313 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 IL7RP16871 459 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 RPS3AP61247 264 aaKnown RBP13.5□□□□□ -0.25
VPS33A-208ENST00000543633 GNA12Q03113 381 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 CACNB2Q08289 660 aaPredicted RBP13.5□□□□□ -0.25
VPS33A-208ENST00000543633 KCNAB2Q13303 367 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 AP5B1Q2VPB7 878 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 CRTC3Q6UUV7 619 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 GPR149Q86SP6 731 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 CIR1Q86X95 450 aaPredicted RBP13.5□□□□□ -0.25
VPS33A-208ENST00000543633 HIPK1Q86Z02 1210 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 MICU2Q8IYU8 434 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 SETD9Q8NE22 299 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 MDGA1Q8NFP4 955 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 OR52B6Q8NGF0 335 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 RMDN1Q96DB5 314 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 CCDC138Q96M89 665 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 NSMCE3Q96MG7 304 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 ZNF641Q96N77 438 aaPredicted RBP13.5□□□□□ -0.25
VPS33A-208ENST00000543633 NODALQ96S42 347 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 AMBRA1Q9C0C7 1298 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.5□□□□□ -0.25
VPS33A-208ENST00000543633 SELENONQ9NZV5 590 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 BAG5Q9UL15 447 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 ERVW-1Q9UQF0 538 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 CORINQ9Y5Q5 1042 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 HSPE1-MOB4S4R3N1 261 aa13.5□□□□□ -0.25
VPS33A-208ENST00000543633 TTC3P53804 2025 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 C1orf232A0A0U1RR37 186 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 SLC12A8A0AV02 714 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 J3QRK9 145 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 OR7A17O14581 309 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 RGS14O43566 566 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 NIPSNAP2O75323 286 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 BCAS1O75363 584 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PCMT1P22061 227 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CD52P31358 61 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 MC4RP32245 332 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 HTR6P50406 440 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 HNRNPFP52597 415 aaKnown RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CD47Q08722 323 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 TRAF3Q13114 568 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ATP1A4Q13733 1029 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 GTF2H2Q13888 395 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 OXA1LQ15070 435 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 DDR2Q16832 855 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 C10orf120Q5SQS8 335 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 NADSYN1Q6IA69 706 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PSAPL1Q6NUJ1 521 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 GTF2H2CQ6P1K8 395 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 GTF2H4Q92759 462 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 FBXL8Q96CD0 374 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 SH3YL1Q96HL8 342 aaPredicted RBP13.49□□□□□ -0.25
VPS33A-208ENST00000543633 GABARAPL1Q9H0R8 117 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 PIF1Q9H611 641 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 AKIP1Q9NQ31 210 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 NECTIN3Q9NQS3 549 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ATAD3AQ9NVI7 634 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 VAPAQ9P0L0 249 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ADGRE2Q9UHX3 823 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CCL27Q9Y4X3 112 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 ORC6Q9Y5N6 252 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 E5RI56 91 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 CXCR6O00574 342 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 SYN3O14994 580 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 RAD51BO15315 384 aa13.49□□□□□ -0.25
VPS33A-208ENST00000543633 KDELR3O43731 214 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms