RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 HP1BP3Q5SSJ5 553 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-215ENST00000540904 NEPROQ6NW34 567 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 TMEM135Q86UB9 458 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 PLXDC1Q8IUK5 500 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 PHC3Q8NDX5 983 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 RSC1A1Q92681 617 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 TFGQ92734 400 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-215ENST00000540904 FGF11Q92914 225 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 TRIM44Q96DX7 344 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-215ENST00000540904 STAMBPL1Q96FJ0 436 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 SNF8Q96H20 258 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 SIGLEC10Q96LC7 697 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 TGM7Q96PF1 710 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 FERD3LQ96RJ6 166 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 TSSK1BQ9BXA7 367 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 KIR3DX1Q9H7L2 352 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 ASCL3Q9NQ33 180 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 THSD1Q9NS62 852 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 PDP2Q9P2J9 529 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 COLEC10Q9Y6Z7 277 aa9.01□□□□□ -0.97
SNHG1-215ENST00000540904 ACACBO00763 2458 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 KNTC1P50748 2209 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CHD8Q9HCK8 2581 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 SLC5A10A0PJK1 596 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 HGSO14964 777 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 TLX3O43711 291 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 RASSF9O75901 435 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 URI1O94763 535 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 USP1O94782 785 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 SEC31AO94979 1220 aaKnown RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 ITGA2BP08514 1039 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CCL4P13236 92 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 PGAM1P18669 254 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 OGNP20774 298 aaKnown RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 NDUFS1P28331 727 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 FMO4P31512 558 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CCR7P32248 378 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CSTF2P33240 577 aaKnown RBP eCLIP9□□□□□ -0.97
SNHG1-215ENST00000540904 ETV5P41161 510 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CAPZBP47756 277 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 LEPRP48357 1165 aaKnown RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 CD151P48509 253 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 MAPK10P53779 464 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 ERVPABLB-1P60509 514 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 PLOD1Q02809 727 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 HSPA14Q0VDF9 509 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 PRKG2Q13237 762 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 LONRF1Q17RB8 773 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 TYSND1Q2T9J0 566 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 RNF187Q5TA31 235 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 ZNF470Q6ECI4 717 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 HIBCHQ6NVY1 386 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 IRGCQ6NXR0 463 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 KLHL35Q6PF15 583 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 IGF2-ASQ6U949 168 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 FAM92BQ6ZTR7 304 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 MAATS1Q7Z4T9 603 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 PDZD3Q86UT5 571 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 LRRC6Q86X45 466 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 FAM129CQ86XR2 697 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CILP2Q8IUL8 1156 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 PDIK1LQ8N165 341 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 KRT222Q8N1A0 295 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 SERBP1Q8NC51 408 aaKnown RBP eCLIP9□□□□□ -0.97
SNHG1-215ENST00000540904 AGBL5Q8NDL9 886 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 LKAAEAR1Q8TD35 194 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 ZFPM2Q8WW38 1151 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 NAF1Q96HR8 494 aaKnown RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 ZNF578Q96N58 590 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 PWWP2AQ96N64 755 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 TCF12Q99081 682 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 EBNA1BP2Q99848 306 aaKnown RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 HGH1Q9BTY7 390 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CARD6Q9BX69 1037 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 P2RY12Q9H244 342 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 C20orf96Q9NUD7 363 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 SLC24A2Q9UI40 661 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 GNPTGQ9UJJ9 305 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 ASF1AQ9Y294 204 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 CRYL1Q9Y2S2 319 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 SNX24Q9Y343 169 aa9□□□□□ -0.97
SNHG1-215ENST00000540904 TPRP12270 2363 aaKnown RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 COL27A1Q8IZC6 1860 aaPredicted RBP9□□□□□ -0.97
SNHG1-215ENST00000540904 OR6C74A6NCV1 312 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 FAM187AA6NFU0 413 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 EFCAB7A8K855 629 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 CDRT15L2A8MXV6 281 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 BHMG1C9JSJ3 638 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 SMAPO00193 183 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 RAD51CO43502 376 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 TTC4O95801 387 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 C9P02748 559 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 APOA4P06727 396 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 F7P08709 466 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 FGF3P11487 239 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 RPS3P23396 243 aaKnown RBP eCLIP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 AOAHP28039 575 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 ELK3P41970 407 aa8.99□□□□□ -0.97
SNHG1-215ENST00000540904 MLLT3P42568 568 aaPredicted RBP8.99□□□□□ -0.97
SNHG1-215ENST00000540904 SLC1A2P43004 574 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms