RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ITIH1P19827 911 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 IMPDH1P20839 514 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 PTPN3P26045 913 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 HTR1EP28566 365 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 LRPAP1P30533 357 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MSX2P35548 267 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 GRK3P35626 688 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 SOX18P35713 384 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 BCAT1P54687 386 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MLLT6P55198 1093 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CRADDP78560 199 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 NFKB2Q00653 900 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 IRF9Q00978 393 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 PLAURQ03405 335 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MBTD1Q05BQ5 628 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 HYAL2Q12891 473 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM132DQ14C87 1099 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 ACAP2Q15057 778 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CRY1Q16526 586 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TRIM16LQ309B1 348 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 ANKDD1AQ495B1 522 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 C2orf27AQ580R0 203 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 RPS26P11Q5JNZ5 115 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 FGD3Q5JSP0 725 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TSTD2Q5T7W7 516 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 JADE1Q6IE81 842 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TMEM53Q6P2H8 277 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 PARM1Q6UWI2 310 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 ZNF852Q6ZMS4 543 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 GK5Q6ZS86 529 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 SPATA19Q7Z5L4 167 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 ANKRD13BQ86YJ7 626 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 SLC15A4Q8N697 577 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 RNF148Q8N7C7 305 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 HMGCLL1Q8TB92 370 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CALML6Q8TD86 181 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 GATAD2BQ8WXI9 593 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 KCTD13Q8WZ19 329 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 STARD8Q92502 1023 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 FGF13Q92913 245 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 L3HYPDHQ96EM0 354 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MFSD3Q96ES6 412 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 SH3YL1Q96HL8 342 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TEKT5Q96M29 485 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 AGAP2Q99490 1192 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 LGMNQ99538 433 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CLSTN3Q9BQT9 956 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 OSBPL10Q9BXB5 764 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 FOXQ1Q9C009 403 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 BHLHE41Q9C0J9 482 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 HPS4Q9NQG7 708 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 FBXO8Q9NRD0 319 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 IARS2Q9NSE4 1012 aaKnown RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 SPATA6Q9NWH7 488 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MIOSQ9NXC5 875 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 DPP3Q9NY33 737 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 KLHL8Q9P2G9 620 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 ANKMY1Q9P2S6 941 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 SLC17A6Q9P2U8 582 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 HMGXB4Q9UGU5 601 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 TRAF6Q9Y4K3 522 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 UGT2A1Q9Y4X1 527 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MAP1BP46821 2468 aaKnown RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CHD6Q8TD26 2715 aa7.56□□□□□ -1.2
CCDC60-204ENST00000539847 CCDC78A2IDD5 438 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 J3QW42 95 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 IFRD1O00458 451 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 MAN2B1O00754 1011 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 MFSD11O43934 449 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 RSL1D1O76021 490 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ANXA9O76027 345 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 C8AP07357 584 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NFICP08651 508 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CXCL8P10145 99 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PABPC1P11940 636 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 NCAM1P13591 858 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 GOT1P17174 413 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PAMP19021 973 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 HTR7P34969 479 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ADRA1BP35368 520 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 GRIA3P42263 894 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 MASP1P48740 699 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CCR3P51677 355 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SLC7A2P52569 658 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ATXN1P54253 815 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 PRAMEP78395 509 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
CCDC60-204ENST00000539847 TRAF2Q12933 501 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 BNIP3Q12983 259 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SEMA3BQ13214 749 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ITGADQ13349 1161 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 IL18R1Q13478 541 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ACOX1Q15067 660 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 DLG2Q15700 870 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 SLC10A6Q3KNW5 377 aa7.55□□□□□ -1.2
CCDC60-204ENST00000539847 ZC3H12BQ5HYM0 836 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms