RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 FAM98AQ8NCA5 519 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 FATE1Q969F0 183 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 SMURF1Q9HCE7 757 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NOP16Q9Y3C1 178 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CASP8AP2Q9UKL3 1982 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CYP3A7-CYP3A51PA0A087WV96 503 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PSMD9O00233 223 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CBX4O00257 560 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NME6O75414 186 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ANXA5P08758 320 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CYP3A7P24462 503 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TIGD3Q6B0B8 471 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TWIST2Q8WVJ9 160 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 XPNPEP1Q9NQW7 623 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 VPS28Q9UK41 221 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MYOM1P52179 1685 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 FABP3P05413 133 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 RAP2AP10114 183 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 HOXB8P17481 243 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NDST1P52848 882 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 SBK1Q52WX2 424 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TLDC1Q6P9B6 456 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PSTKQ8IV42 348 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 GPALPP1Q8IXQ4 340 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CLP1Q92989 425 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MTMR9Q96QG7 549 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ACTR3BQ9P1U1 418 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PDCD11Q14690 1871 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 EFCAB6Q5THR3 1501 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PDCD5O14737 125 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CYP11A1P05108 521 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TRIM23P36406 574 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CAPZA1P52907 286 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PTPRNQ16849 979 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 STXBP5Q5T5C0 1151 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MARC1Q5VT66 337 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MKL1Q969V6 931 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 OXCT2Q9BYC2 517 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 OSGEPL1Q9H4B0 414 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ASF1BQ9NVP2 202 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ABHD14A-ACY1A0A1B0GW23 586 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 POU2F1P14859 743 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PRKCIP41743 596 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 DNASE1L1P49184 302 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 INSCQ1MX18 579 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF674Q2M3X9 581 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MGAT5BQ3V5L5 792 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF425Q6IV72 752 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PNMA5Q96PV4 448 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 KXD1Q9BQD3 176 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 GATA5Q9BWX5 397 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 UCK2Q9BZX2 261 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 NT5C1B-RDH14C9J2C7 533 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 H3BNH8 94 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 FAM83AQ86UY5 434 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TOMM5Q8N4H5 51 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 OR5H6Q8NGV6 325 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 EBPLQ9BY08 206 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 KCNH7Q9NS40 1196 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 FAM208AQ9UK61 1670 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 JCADQ9P266 1359 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 GATBO75879 557 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PGAM2P15259 253 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 TAL1P17542 331 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 CCR10P46092 362 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 MSANTD2Q6P1R3 559 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ERMP1Q7Z2K6 904 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 SNX29P2Q8IUI4 249 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 ACBD4Q8NC06 268 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 OR10A6Q8NH74 314 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 C9orf43Q8TAL5 461 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 SLC7A6OSQ96CW6 309 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 LGMNQ99538 433 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 EXO5Q9H790 373 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 LSM7Q9UK45 103 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 FARSAQ9Y285 508 aaKnown RBP5.59□□□□□ -1.51
CSMD1-215ENST00000537824 PCDHGA11Q9Y5H2 935 aa5.59□□□□□ -1.51
CSMD1-215ENST00000537824 IRS2Q9Y4H2 1338 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 NRXN1Q9ULB1 1477 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 USP32Q8NFA0 1604 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 RGPD2P0DJD1 1756 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 TEX51A0A1B0GUA7 166 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 PCDHGA12O60330 932 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 OTCP00480 354 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 PTX3P26022 381 aaPredicted RBP5.59□□□□□ -1.52
CSMD1-215ENST00000537824 RPL7AP62424 266 aaKnown RBP5.59□□□□□ -1.52
CSMD1-215ENST00000537824 ANXA8L1Q5VT79 327 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 OR52E8Q6IFG1 317 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 ARL9Q6T311 187 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 FAM109AQ8N4B1 249 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF334Q9HCZ1 680 aaPredicted RBP5.59□□□□□ -1.52
CSMD1-215ENST00000537824 PCDH15Q96QU1 1955 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 MUC4Q99102 2169 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 A0A1B0GV50 99 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 ADAMDEC1O15204 470 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF254O75437 659 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 CD79BP40259 229 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms