RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 HAUS5O94927 633 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ACADLP28330 430 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GABRB3P28472 473 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CSE1LP55060 971 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZFP36L1Q07352 338 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RPA4Q13156 261 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SQSTM1Q13501 440 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PTRHD1Q6GMV3 140 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CNSTQ6PJW8 725 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PDZD3Q86UT5 571 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLITRK4Q8IW52 837 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CNTN4Q8IWV2 1026 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZBED8Q8IZ13 594 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CEP112Q8N8E3 955 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 AVL9Q8NBF6 648 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 C2CD4AQ8NCU7 369 aaPredicted RBP11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CALML6Q8TD86 181 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SH3KBP1Q96B97 665 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FAM136AQ96C01 138 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ATXN7L3BQ96GX2 97 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 DEPDC7Q96QD5 511 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NRTNQ99748 197 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FAM167BQ9BTA0 163 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SEMA6CQ9H3T2 930 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 STN1Q9H668 368 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 L2HGDHQ9H9P8 463 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SAYSD1Q9NPB0 183 aa11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 INTS10Q9NVR2 710 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-208ENST00000536194 KNTC1P50748 2209 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 IGHV5-10-1A0A0J9YXX1 117 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 EIF3HO15372 352 aaKnown RBP eCLIP11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ZNF500O60304 480 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CPNE6O95741 557 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ESR1P03372 595 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 C1QTNF9P0C862 333 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ECHS1P30084 290 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SSTR1P30872 391 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 ABCG1P45844 678 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CD151P48509 253 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CARSP49589 748 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 EPHA4P54764 986 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GPLD1P80108 840 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CAV1Q03135 178 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 HSPA14Q0VDF9 509 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 FRG1Q14331 258 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GBX1Q14549 363 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TEDDM1Q5T9Z0 273 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CAPN12Q6ZSI9 719 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PIM3Q86V86 326 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LMNTD2Q8IXW0 634 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLC22A15Q8IZD6 547 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PHC3Q8NDX5 983 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 OR10G6Q8NH81 332 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RSC1A1Q92681 617 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TMEM159Q96B96 161 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PANX3Q96QZ0 392 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLC30A3Q99726 388 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PHACTR1Q9C0D0 580 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 KIR3DX1Q9H7L2 352 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MOCS1Q9NZB8 636 aa11.04□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TRABD2BA6NFA1 517 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 F8W8V4 182 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 IFRD1O00458 451 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PIAS1O75925 651 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 UBXN7O94888 489 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SLCO2B1O94956 709 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 C1QAP02745 245 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 AHSGP02765 367 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CAPNS1P04632 268 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PKMP14618 531 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TYRP1P17643 537 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MPSTP25325 297 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CCKBRP32239 447 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 MAPK9P45984 424 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 LEPRP48357 1165 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 INHBCP55103 352 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GFERP55789 205 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GPX6P59796 221 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PPP1CAP62136 330 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TIAL1Q01085 375 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SYTL3Q4VX76 610 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GLE1Q53GS7 698 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 UBAP2Q5T6F2 1119 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RBM12BQ8IXT5 1001 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 RCBTB1Q8NDN9 531 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 OR4D9Q8NGE8 314 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 OR5AR1Q8NGP9 310 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 PYROXD1Q8WU10 500 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TFGQ92734 400 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 C9orf72Q96LT7 481 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 CCDC74BQ96LY2 380 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 NDNQ99608 321 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 TSSK1BQ9BXA7 367 aa11.03□□□□□ -0.64
TNFRSF1A-208ENST00000536194 SMYD2Q9NRG4 433 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms